Pectinophora gossypiella (pink bollworm): 126371852
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Entry
126371852 CDS
T09293
Name
(RefSeq) structural maintenance of chromosomes protein 6
KO
K22804
structural maintenance of chromosomes protein 6
Organism
pgw
Pectinophora gossypiella (pink bollworm)
Brite
KEGG Orthology (KO) [BR:
pgw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgw03400
]
126371852
DNA repair and recombination proteins [BR:
pgw03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
126371852
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_29
SMC_hinge
CALCOCO1
DUF4164
PI3K_P85_iSH2
Tropomyosin
FtsK_SpoIIIE
DUF5570
ABC_tran
Motif
Other DBs
NCBI-GeneID:
126371852
NCBI-ProteinID:
XP_049873198
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All DBs
Position
2:2247187..2264706
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AA seq
1037 aa
AA seq
DB search
MEIDTENGEESVDGCIMSIHVRNFFCHDNLEINLNRNVNLIVGRNGSGKSAILTALVVGL
GGRASATNRGSNLHSFVKNGSNSSMVEIKIKNSCSTAYKPDVYGDTITIVRNINSSGSNY
KVKSATGEVKSTKFEEVNAIVLAHDIQVDNPISVLNQDDARSFHASDPKTKYLLYRKATN
LDQTEKNYKLAIENCAKANNIWKRKWDACAEQEKEFKKWQAIHDQMKSRDEIEAKKTALQ
NEYYWSEITEMERDAATVQAQYEKQKARIEKLVDKLERMQQNYGSNTDAIDKLKAELEQK
NQEKSRLEQELHGLEAEVREMQSTWRSAQGAINKHKELLSREARKVADLEREIQNIDSGS
AASRRAELEAQAASAKEAAAAALARYSTVENDVAQARAGAAHAQGEADLAAGRAARERNS
IKQLKQQLRELESRGNDSLAVYGNNMVELVRRVKAAADRGEFSQPPRGPVGAYLKVKEKK
WGGALEHIIGGSIQSFCVNSPEDSRKLFQIMGQVYGNAAKPAVTCSQFLAKQHDVRRNKV
SAAGFLCALDAVDVTDTVVANYLIDNVGLESILLVPEHEDAVRLSDTVENVPEKCSKIVT
LDGSEYYPAPNYRSYGGAARASRFLHLSTHERKRQVQAEIQEAESKLVRIEQQAQQLNDA
ASQARDAERAASRQLQALLGPRHDAERAARAAAAALDTAHAPHHAVLVDELNISKEKVQT
MRLQVEKFAAKEQSYKEKVDDYDAKMKEVKSKLARATNTCRNLSEEIDQEQLKQDHEVTE
RRTCEQKLNEDKRKLSQVEVILEEKFNEVRCKIDEAVKLCPRIDDPRDKTLVRNELKKAE
LKLSSIRSDGMTKAEVAERLLQVGRKYRRDHASLTTLRAIIHEIKQTSEKHLNICYNVQT
DVARRVQHSFQAMLSLRGYSGSMEIDNTRGLLEIKCTGRESSAKRHASTTSSLSGGERSY
STVAFIMALWECVELPFYFMDEFDVFMDDVNRKIVLRLLIDYALKNTRRQFVLLTPQDAS
VTAEPRISIHRMPDPRP
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atggaaatagatacggaaaacggagaagaaagcgttgatggttgtattatgagtatacat
gtgcgtaatttcttttgtcatgacaatttggaaattaatttgaacagaaatgtaaatttg
atcgttggacgtaacggcagtggaaagagtgctattctcacggctttggtcgtaggtctg
ggcggcagggcctccgctacgaacaggggaagcaacttgcactcttttgtaaagaatgga
tctaattcatcaatggtggaaattaagattaagaacagctgctctacagcctataagccc
gatgtttacggagacaccattactattgtgaggaacattaattcctcagggtccaattat
aaagtgaaatcagcaacaggtgaagtaaaatcaacaaagtttgaagaggtgaatgcaatt
gtactagctcatgacattcaggtggacaaccctatctccgtgttgaaccaggacgacgct
cggagcttccacgcctcggatcctaagaccaagtacttgctgtacagaaaagccactaac
ttggatcagacagagaaaaactataagttggccattgagaattgtgctaaagctaataat
atttggaagaggaaatgggatgcctgtgcagaacaagagaaagagttcaagaagtggcaa
gcgatccacgaccagatgaagtcccgtgacgagatcgaggcaaaaaaaacagctttacaa
aacgagtactattggagtgagattactgagatggaacgggacgcggcgaccgtgcaggcg
cagtatgagaagcagaaggctcggattgagaagctcgtcgacaaactcgagcgtatgcag
cagaactacgggtctaacactgatgccattgataaactaaaagcggaactggaacagaag
aatcaagagaagtcccgcttagagcaggagttgcacggcttggaggccgaggtgcgcgag
atgcagagcacgtggcgctccgcacagggcgccatcaacaagcacaaggagctattgagc
cgggaggcgcggaaggttgccgacttggagcgggagattcagaacatcgattcaggcagc
gcggcgtcgcgtcgcgcggagctggaggcgcaggcggcgtccgcgaaggaggcggcggcg
gcggcgctggcgcggtacagcacggtggagaacgacgtggcccaggcgcgcgccggcgcc
gcgcatgcgcagggggaggccgacctggccgccgggcgcgccgccagggagcggaactct
atcaaacaactgaagcaacagctccgcgagctggagtcccgaggcaacgactcgctggct
gtatacggcaacaacatggtggagctggtgcggcgggtgaaggcggccgccgaccggggg
gagttcagccagccgccgcgaggacccgtcggtgcgtacctgaaagtgaaggaaaagaag
tggggcggcgcgctggagcacatcatcggcggctccatacaatcattctgcgtcaactcg
cccgaggactcgaggaagctgttccaaatcatgggacaggtatacggcaatgcagccaag
ccagcagtgacctgtagccagttcctggcgaagcagcacgacgtgcgccgcaacaaggtg
tcggccgcgggcttcctgtgtgcgctggacgccgtggacgtcaccgacaccgtcgtcgcc
aactacctcatcgacaacgtggggctggagagtatactgctcgtgcccgaacatgaggac
gcggtgaggctgtcagacacggtggagaacgtaccggagaagtgttccaagattgtgacg
ctggacggctccgagtactacccggcgcccaactacaggagctacggcggcgccgcgagg
gccagcaggttcctgcacctcagcacgcacgagaggaagcgacaagtgcaagcggagatc
caggaggcagagtcgaagctcgtgcgcatagagcagcaggcccagcagctgaacgacgcg
gccagccaggcgcgcgacgccgagcgggccgccagccgccagctgcaggcgctgttaggc
ccgcgccacgacgccgagcgggccgcgcgcgccgccgccgccgcgctcgacaccgcgcat
gcgccgcaccacgccgtgctggtggacgaactgaacatatccaaagagaaagtgcagacg
atgcgtctccaagtggaaaagtttgcggccaaagagcagtcatataaggaaaaggtcgat
gactacgacgcgaagatgaaggaagtcaagagcaagctggctcgtgccaccaatacttgc
aggaatttgagcgaagaaatagaccaggaacaattaaagcaagaccatgaagtaacagag
cggcgcacgtgcgagcagaaactgaacgaggacaaacgcaagctgagccaggtggaagta
atactggaggaaaagttcaatgaagtcagatgcaagattgacgaggccgttaaactgtgc
cccaggattgatgaccctagagacaaaaccctagtacgaaacgagctgaagaaagctgaa
ctcaagctgagttccatccggagcgacggcatgacgaaggccgaggtggccgagcgactg
ctgcaggtcggccgcaagtaccgccgcgaccacgcctcgctcaccaccctgcgtgccatc
atacacgagatcaaacaaacgtcggagaagcacttgaacatttgttacaacgtgcagaca
gacgtcgcgcgcagggtgcagcactccttccaagccatgctctccttgcgcgggtactcg
ggtagcatggaaatcgacaacacccgcggcctcctcgagatcaagtgcacaggccgcgag
tcgagcgccaagcgacacgcgtccaccacgtcgtccctgtcgggcggcgagcgctcctac
tccaccgtggccttcatcatggcgctgtgggagtgcgtcgagctgcccttctacttcatg
gacgagttcgatgtctttatggacgacgtaaaccgcaagatagtcttgcggctgctgata
gactacgcgctgaagaacacgcgccgccagttcgtgctcctcacgccgcaagacgcctcc
gtcaccgccgaaccacgaatcagtattcacaggatgccagatccccgaccttaa
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