Pectinophora gossypiella (pink bollworm): 126372042
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Entry
126372042 CDS
T09293
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
pgw
Pectinophora gossypiella (pink bollworm)
Pathway
pgw03030
DNA replication
pgw03420
Nucleotide excision repair
pgw03430
Mismatch repair
pgw03440
Homologous recombination
pgw03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pgw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
126372042
03420 Nucleotide excision repair
126372042
03430 Mismatch repair
126372042
03440 Homologous recombination
126372042
03460 Fanconi anemia pathway
126372042
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgw03000
]
126372042
03032 DNA replication proteins [BR:
pgw03032
]
126372042
03400 DNA repair and recombination proteins [BR:
pgw03400
]
126372042
Transcription factors [BR:
pgw03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
126372042
DNA replication proteins [BR:
pgw03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
126372042
DNA repair and recombination proteins [BR:
pgw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
126372042
MMR (mismatch excision repair)
126372042
DSBR (double strand breaks repair)
HR (homologous recombination)
126372042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
PAS_8
IBR
Motif
Other DBs
NCBI-GeneID:
126372042
NCBI-ProteinID:
XP_049873501
LinkDB
All DBs
Position
13:8776853..8784787
Genome browser
AA seq
604 aa
AA seq
DB search
MAYKLSEGSLEIIMNGGHYDKPVMQVLGSKKIQGSGANERFRLLVSDGKHSHSFAMLATQ
LNDKLITGELSDYSVVQIDRFVTSLLKNTGKGEKRVMIILDITILASGAAVGKKIGNPVT
WSEDAAPTTPAQAPMQPVPKQNPAPSPIGRMANGSAPSLDTSLISSQMTHPIASLSPYQN
KWIIKARVMSKSPVRTWSNARGEGKLFSMDLCDESGEIRATAFRDAVDKFYDMIQVDKVY
YISRCQLKTANKQFTNLKNDYEMTFTNETVVAECTEDSSSVPTIKYDFVPISDIANKTPD
VILDVIGVCKSAADVQELTARTTGKLLKKREATLVDQSGGAIVLTLWGNEAETFDASTNP
VVSAKGARLTEFNGSKSLSCAASTMLRLNPDLPEAHKLRGWYDNGGADMEIVNISARQGG
YSGGSNEWLTFSEAEARQLGSGEKGDYYSLLGVLTFTFADNAVYKACPQEQCNKKLVDQE
NGLFRCEKCNREYPNYKYRLLLGATVSDPTGDQRITAFNESAEAMLGKPAADIGRMFEYD
KAGYSQLFEDVKFQTFVFKFRTKLETYNDEARLKTTVMTAVPVDYKDANARLLKSIKSVT
GVEV
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggcctataaactttcagaaggatctcttgagataattatgaacggtggtcattatgat
aagccggtaatgcaagtgttaggaagcaaaaagatccaagggagtggagcaaacgagcgg
tttcgcctgctggtgtctgacgggaagcactcccacagtttcgccatgcttgcgacacag
ctaaatgacaaattgatcacaggagaactctcagactattcagttgtacaaattgatcgc
tttgtcacatcactgcttaagaatacaggcaaaggagaaaagagggtaatgatcatcttg
gacattaccatcttggcttctggggcagcagttgggaaaaagattggaaacccggtaaca
tggtctgaggatgctgcaccaacaacccctgctcaggccccgatgcaacctgtgcctaaa
caaaacccagcaccatctccgataggacgtatggctaatggttcagcccccagtctagac
accagtctaatatcctcacagatgactcaccctatagccagcttgagtccttatcaaaac
aaatggataataaaagctcgcgtgatgagcaagtcgccggtgcgcacgtggagcaacgcc
cgcggagagggcaagctgttcagcatggacctctgcgacgagagcggcgagatccgcgcc
accgccttcagggacgccgtcgacaagttctacgacatgatacaggtggacaaagtatat
tacatcagccgctgccagctcaagactgctaacaaacagtttaccaatttgaagaacgac
tatgagatgacgttcactaacgagacagtagtcgccgagtgcactgaagactcgtcctct
gtacctaccatcaaatatgattttgtacccatcagcgacattgctaataaaacccctgat
gtaatactagatgtgattggcgtttgcaaatctgctgctgacgttcaggagctcacagct
agaactaccggcaaattgctgaagaaaagagaagcgacactcgtcgaccagtccgggggc
gctattgtcttgactttgtggggaaatgaagcagaaactttcgatgccagcactaatcca
gtggtatcagctaagggcgcccggctgacggagttcaacggtagcaaatccctgtcatgc
gcggccagcactatgctacggctgaaccccgatttgcctgaagcacacaagctgcgcggc
tggtacgacaacggaggcgccgatatggaaatcgtcaatatatctgctaggcaaggcggg
tactcgggaggcagcaacgagtggctgacgttctctgaagctgaagcgcgtcaactgggc
tccggcgagaagggagactactactcgttgctcggagtcctcacgttcacattcgcggac
aacgccgtatacaaggcctgtccgcaggaacagtgtaacaagaaactcgtcgaccaagag
aatggactgttcagatgcgagaaatgcaacagggaataccccaactataaatacaggctg
cttttgggggctaccgtatcagacccgacaggcgaccagcgtataactgcgttcaacgag
tccgcggaggcgatgctcggcaagcccgccgcagacatcggccgcatgttcgagtacgac
aaggccggatactcgcaactctttgaggacgtcaaattccaaaccttcgtatttaagttc
cgcacaaaattggaaacttacaacgatgaagcgaggctgaagactacagtcatgacagct
gttccggtcgattacaaagacgctaatgctcggcttcttaaaagcatcaaatctgttaca
ggtgtggaagtatag
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