Pectinophora gossypiella (pink bollworm): 126372095
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Entry
126372095 CDS
T09293
Name
(RefSeq) mutS protein homolog 4-like isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
pgw
Pectinophora gossypiella (pink bollworm)
Brite
KEGG Orthology (KO) [BR:
pgw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pgw03036
]
126372095
Chromosome and associated proteins [BR:
pgw03036
]
Eukaryotic type
Meiosis-specific proteins
Others
126372095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
Motif
Other DBs
NCBI-GeneID:
126372095
NCBI-ProteinID:
XP_049873596
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Position
13:12245772..12256288
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AA seq
1269 aa
AA seq
DB search
MNVVQREKHSNVKAPSKLRNELVRKDASVGIRGASLLPIVPYNISNINRSTNSGPRYQFN
KNEPSTSRGNKTCTMGPPLGPPRSAKRKIIHNSNSTKPESSSSGPRPKILASDSAAVDTS
FDYCTPRNRPTALRYISSSSRGGHSGTRSGRSTSTSALEASVILAISEGRGMARGEIGMA
AVDLRQPHLVLCQFSDTLLYVHTLTKINYFNPVEIIVPHTFCEGVQPNQLYQLIRDHYPL
VNLTTVQRRHFNDAAGRQQIQTLCAPQYSGVYLQVLHKFYAVTAAAAVLKYVEYIQCIVF
ARESLKIEYHSSEDTMVIGKVFWLVRVCCSLVVERFVFVAERKGTFMPIHIGTPIIHLFS
LLDVGTATQLELVQPLVPSAGSTCCLLGVLGPTYTVGGIRALRAAILQPSCNKEFIEGRL
DALQDLIENDEGLMTSLQDVVKKLADVDKILFLCMDSQNQNMDKVGEAQLNQTLLLKTTM
EMVPKLIEALNVAESGRLRKIKMDFENPHYNEIAERIKTIIQDDAHLERGAMGSLQRCFA
VKPDINGLLDVARRTYSELIDDIQKIVEQLSETYDIPIRLNQNVMKGFHIVMSIAPKNRR
SFNVEDLPPVFIQVHNSGASVSMTTEELVVLDQQAKESLNEIQKMSNIVISSLLKELRPF
MSSLYKLCENVAELDILLAMAQASSVGSYIRPEFGTYLEIRNSVHPLLDYNSQVMPVPND
IFASPEQNFTIITGPNMGGKSIYIKQIAVMQIMAQLGCFVPATNAVLRLCDRIFSRIGFN
DSVELNASTYVFEMKEMQHIMTGLTKSSLVIIDELCRGTCTEEGTSIAWAICEELLISDA
FVFFTTHFMYLTRLQDLYFNVVNLHTAVTEEEIPETQNLQKRLVYQHKIDAGATEIEHYG
LALAEKTNLPEDTVKLARELAELIVQNRKPQEMNTVEINDEHVLYKLNAEIRQESRKHDN
AEDVIKAKLRKFKEEHPLLIERLKVQRSRINIRTDSSVNYSSIANSRQSGISNVAIVCRE
GLCEEKNTGNVETTVRSSNVICSPSDPNNGTSSSNEIRSMTKLRQPFQPPFKNCNKTPNH
KPTVIYSTTSDDAENYETSHSNNNIFTSVKSSNELLTTLMNNYNEEVEQNELVEKTIDSS
DNKELPREVVEEALCSVNISDCNNNIHINVDIDNVNSKDEITYTAESVNGKRNENFDLSD
DSDIADALTQVIEEYSVEEQSMDLEKSEDDISIDEELMVETINEIHKEINSEELSVENII
LTPPVEFQD
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtagttcagagagaaaaacattctaatgttaaagcaccatcaaaactaagaaat
gaattagtaaggaaggatgcttcggtgggtatacgaggtgcatcgttgctacctattgtt
ccctacaacatatcaaatattaatcgttctacaaatagtggaccacgatatcaattcaac
aaaaatgagccttcaacttcaagaggcaataaaacatgtactatgggtccccctcttggg
ccaccacgtagcgctaagcgaaaaataatacacaattcgaactcgacgaaaccggagtcg
tcatcaagcgggccgcgcccgaagatactggcaagcgattcagctgcggttgacacctcc
tttgactactgcactccgaggaaccggccgacggctttgagatacatcagtagtagcagc
agaggtgggcatagtggtacaagatctggacgttcgacgagtacttcagcgttagaagcc
agcgtcattttagctatatctgaagggcgcggcatggctcgcggggagataggcatggct
gcagtagatcttcgtcaaccacaccttgtgctgtgccaatttagtgataccctcctatac
gttcatacgctgactaagatcaactacttcaatcctgttgagataatagtgccccacaca
ttctgtgaaggagtgcaaccgaaccagttgtaccaactgatcagagatcattatccactg
gtcaacctaaccacggtgcaaagacgccacttcaatgatgcggctggacgccagcaaata
cagaccctttgcgctccacaatatagtggtgtttaccttcaagttctgcacaagttttat
gcagtaacagcggcagcagcagtcctgaaatacgtggagtacattcagtgcattgtattc
gcacgagaatctttgaaaattgaatatcattcttctgaagacaccatggtcatcggtaag
gtattttggttggtccgtgtatgttgcagcctagttgtggaaagatttgtttttgttgca
gaacgaaaaggcacttttatgccaatacatataggtactccaataattcatttattttcc
ttattagatgtaggaactgccactcagctagagttagttcagcctctagtaccgtctgcg
ggatctacctgttgcctactaggtgttctgggaccaacctatacagtcggcggtataaga
gctcttcgcgcagctattcttcaaccttcctgtaataaggagtttatcgaaggcagactc
gatgccttacaagatttgattgaaaatgatgagggactgatgactagcttgcaggatgtt
gtcaaaaaactagctgatgttgataagattttgttcctatgcatggactctcagaatcaa
aacatggacaaagtaggagaagctcaattgaatcaaacactattattaaaaacgaccatg
gagatggttccgaaactaattgaagcgctcaatgtcgctgaaagtggaaggttaagaaaa
ataaaaatggatttcgaaaacccgcattataatgaaatagcagaacgtatcaaaacaatt
attcaagatgatgctcacctcgagcgaggagctatgggtagcctacaacggtgcttcgct
gtcaaacccgatattaacggcctgctagatgtagctagaagaacatattcggaactaata
gatgatatacagaaaattgtagagcaattgagtgagacttatgatattccaatcaggttg
aaccaaaacgtgatgaaaggatttcatatcgtaatgtcaattgctccaaagaataggagg
agtttcaacgtcgaagatttgccaccagtttttatacaggttcacaacagtggagcaagt
gtgtcgatgacaacagaagaattagtagttcttgaccaacaagctaaggaatctctgaac
gaaattcagaaaatgagcaatatcgtgatatcaagtttactaaaagaacttcgcccgttt
atgtcaagtctttacaagctttgtgaaaatgttgctgaactagacatacttttggctatg
gcgcaagcaagttcggtggggtcttatatcagaccagaatttggcacgtacttggaaatc
agaaacagcgtgcatccgcttctagactacaacagccaggtcatgccggtaccaaatgac
attttcgcaagtccagaacagaacttcacaataataacaggaccaaatatgggcggaaaa
agcatttatataaaacaaattgctgtaatgcagataatggctcagttgggctgtttcgtg
cccgctacaaatgctgttttaagattatgcgatcgtatattttcaagaatcggtttcaac
gacagtgtagaactaaatgcttcgacttatgtttttgagatgaaagaaatgcaacacata
atgacaggtctaacgaaatcaagcttagtgatcatcgatgaactctgtagagggacgtgt
actgaagaagggacgagtatagcgtgggctatatgtgaagaattgctaataagcgacgcg
tttgttttcttcacaacacatttcatgtacctgacgagattacaggatttatacttcaac
gttgttaatcttcataccgcagtcacagaagaagaaataccagaaacacaaaatttacaa
aagaggctggtttaccaacataagattgacgcaggggctactgaaatagaacactacgga
ttagctttagccgagaaaactaacctgcccgaagacactgtgaaactggcaagggaacta
gctgagcttattgttcaaaatagaaagcctcaagaaatgaacacagttgagatcaatgat
gaacacgttttgtacaagctaaacgctgaaatcagacaagaatctagaaaacacgacaac
gctgaagatgttatcaaagcgaagctacgaaaattcaaggaagagcaccctttacttata
gaaagactgaaagtacaaagaagtagaataaatatcagaacagacagtagtgttaattat
tcttctattgcgaattcaagacaaagtggtatttctaacgttgcaattgtatgtagagaa
ggactttgtgaagaaaagaatactggaaatgttgagacgacagttagaagttctaacgtc
atttgcagcccatcagatcctaataatggaacctcaagttctaatgaaattagaagtatg
acaaaacttaggcaaccgtttcagccgccattcaagaattgtaataaaacaccaaatcat
aaacctaccgtaatatactctactacgtctgacgatgctgaaaactatgaaacttctcat
tcaaataataacatttttacttcagtgaaatcgtcaaatgagctattgacgactttaatg
aacaattacaatgaagaagttgaacaaaacgagttggtagagaaaacgattgatagttca
gacaacaaagagttaccaagagaagtagttgaagaagctctttgttcagttaatatcagc
gattgtaataacaatattcatataaatgttgatatagacaacgttaatagcaaagacgaa
atcacttatacagcagagtctgttaatggcaaacgtaatgaaaattttgatttgagtgac
gattccgatattgcagacgctttgacgcaagttattgaagaatattcagtagaagaacaa
agtatggatttagaaaagagcgaagatgatatatcgatagatgaagaattaatggtggaa
actataaatgaaattcataaagaaattaatagtgaggaattgagcgtagaaaatattatt
cttacacctccagtagagtttcaagattaa
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