Pectinophora gossypiella (pink bollworm): 126372296
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Entry
126372296 CDS
T09293
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase CshE-like
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
pgw
Pectinophora gossypiella (pink bollworm)
Brite
KEGG Orthology (KO) [BR:
pgw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgw03041
]
126372296
Enzymes [BR:
pgw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126372296
Spliceosome [BR:
pgw03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
126372296
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Flavi_DEAD
Helicase_RecD
AAA_22
AAA_30
AAA_19
Motif
Other DBs
NCBI-GeneID:
126372296
NCBI-ProteinID:
XP_049873942
LinkDB
All DBs
Position
14:7043474..7047171
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AA seq
829 aa
AA seq
DB search
MVLAHSIEEDRTQDVQISENVTFNSMLLAPNTLQGLKNSGFYRPSPIQLHGIPLGKCGFD
LILEAKSGTGKTAVFSIIALEKLDLNVGLQTVILAPTREIAAQICDVIKQLGSSYEGLVV
EVVMGGIPVEEDINKFRDKRVHIIVGSPGRLRHLIQDKYIDVSTIRLFVLDEADKLMEKS
FLPDINYIFSSSPKQKQVIMSSATYPETTKSFIQQYLQSGQHVCPDSNTILLGIKQKLTV
VKYNSNIIKQTKNRFEELQKILSHIAFKQCLIFCNYQVRVAELHKMLTKHNWPAEQLYGQ
QEQLDRLDALKSLQEYKCRILVSTDLAARGIDASNVDLVINFEPPSEWQTFLHRIGRAGR
FGSYGIAITMVSAGKEEQKFCELIKALKFPLNVSNLWNDEQAGSEVANPEPQNSETSCTK
SLITNNREGTHKELWTLLSSDYKSSENEIESFSNLYDSFNNPPIESFSDLISSLQIHDTK
PHETVMNNTYNLMPIQSILDDKYFKSINITKDDRNNDIVNKEKGKKTCELNNNVVDIGIP
VVSHTTKSHDPKDYHDLLNKESNSDEECKKIPNANEALLRAGLPTAFGKCKKNCNNSFTE
YNNAKQKFQVSSHDLGLQSTSVQNNKNKTLNENIENYVNHDNLRESNKLRKQITNISHHN
ENEAFGHYSKSDQYDTYHNQYLANKAESHCNVNNSRKANHHSINNEDEDFGYHSVSYQYR
TFQKSQCTEKNVKSHVNKSRKSEEHRKKAREVLYHGAYYENEALGHNSTSDEYETYHNNA
YNKDLEYSTLNIEYLNVSDVVNYTTWYKNLKNTVNQLQLAIYTDELSKI
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggtgttagctcacagtatagaagaagacagaacacaagatgttcaaatatccgagaac
gtcacttttaattcaatgctattagcacccaatactttgcaagggcttaagaactctggg
ttctatagaccgtctccaatacaattgcatggtattccattaggaaaatgtggatttgac
ttaatactcgaagcaaaatctggaacgggaaaaacagcagtattctcaatcattgcattg
gaaaaattggatctgaatgtaggattgcaaacagtgattttagcaccaactagagagatt
gctgcacagatttgtgatgtcattaaacaacttggatcaagttatgaaggtctagttgtt
gaagtggtaatgggaggcataccagtggaagaagatatcaataagttcagagataaaaga
gtacacatcatagtcgggagtccaggacgattgcggcatttaattcaagacaagtatatt
gatgtgtccactataaggctttttgtcctggatgaagcagataagttaatggaaaaatct
ttcctacctgacataaattatattttttcttcttcaccaaaacaaaaacaagttataatg
agtagtgccacatacccagaaactacaaaatcattcatccaacaatatctacaaagtggc
caacatgtctgcccggatagtaataccatacttcttggtataaaacaaaaattaacagta
gtaaaatataacagtaatattatcaaacaaacaaaaaataggtttgaagaattgcagaaa
atattgtcacatattgcatttaagcaatgcttgattttctgcaactatcaagttagggtg
gcagaactacataaaatgttaactaagcataattggcctgctgaacaattatatggtcag
caagaacaactagaccgtttggatgctttaaaatctcttcaagaatataagtgtagaatt
ttggtttccactgatttggcagctcgtggaatagatgcttccaatgtagacctggtgatc
aattttgagcctccatctgagtggcaaacatttttgcatcgaataggcagagctggtagg
tttggatcttatggaattgcaataactatggtcagtgcaggtaaagaggaacaaaaattt
tgtgaattaataaaagctttaaaattcccattgaatgtaagtaacctgtggaatgatgaa
caagctggcagtgaagttgccaatcctgagccacaaaattctgaaacttcctgcactaaa
tccttaataacaaataatagagaaggaacccataaagaattatggacattactatccagt
gattataaatcaagtgagaatgagatagaaagcttttctaatttatatgattctttcaac
aatcctccaatagaatcattttctgatctcataagttcactacaaattcatgatacaaag
ccacacgaaactgtaatgaacaacacatacaacctaatgcctattcagtctatacttgac
gataagtattttaaatctattaatataacaaaagatgacaggaacaatgatattgttaac
aaggaaaaaggtaagaaaacctgtgaattaaacaataatgttgtggatattgggatacca
gttgtttcacacaccacaaaatcacatgaccctaaagattatcatgatttacttaacaag
gaaagtaattctgatgaggaatgtaagaagatacccaatgctaatgaagctttactcaga
gcaggacttccaacagcttttggaaaatgtaaaaaaaattgtaataattcttttacagaa
tacaataatgccaaacaaaagtttcaagtatcatcacatgatctagggctacaaagtact
tctgtacaaaataataaaaacaaaactttgaatgaaaatatagaaaactatgttaatcat
gataatttaagagaatctaataaacttcgaaaacaaattacgaatatctcacaccataat
gaaaatgaagcttttggacactactcaaagagtgatcaatatgacacatatcacaatcaa
tacctagcaaacaaggccgaatcccattgtaatgtgaacaactcaagaaaagctaatcat
catagtattaataacgaagatgaagatttcgggtatcactcagtaagttaccaatataga
acatttcagaagtcacaatgtacagaaaaaaatgtgaaatcccatgttaataaatcaaga
aaatctgaggaacatagaaaaaaagctagagaggttttatatcatggagcatattatgaa
aatgaggcccttggacacaactctacaagtgatgagtatgaaacataccataacaatgca
tataataaagaccttgaatattcaaccctcaatatagagtacctaaatgtgagtgatgtt
gtcaattacacaacttggtataaaaaccttaaaaatacagttaatcagctacaacttgca
atatacactgatgaactgtcaaaaatttaa
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