Pectinophora gossypiella (pink bollworm): 126372622
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Entry
126372622 CDS
T09293
Name
(RefSeq) ATP-dependent RNA helicase p62
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pgw
Pectinophora gossypiella (pink bollworm)
Pathway
pgw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126372622
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgw03041
]
126372622
03009 Ribosome biogenesis [BR:
pgw03009
]
126372622
Enzymes [BR:
pgw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126372622
Spliceosome [BR:
pgw03041
]
Complex A
U1 snRNP components
U1 related factors
126372622
Complex B
126372622
Ribosome biogenesis [BR:
pgw03009
]
Eukaryotic type
Pre-60S particles
Helicases
126372622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
126372622
NCBI-ProteinID:
XP_049874405
LinkDB
All DBs
Position
14:8584118..8588117
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AA seq
554 aa
AA seq
DB search
MSGNWSNSRENGGSKFGSGGGSRFGSSGGGRFGSGGGNGGSRFGSNGGGNSRFGGGGGKK
EFSGGQNMRRPNWDSLTLQPFNKDFYNPHPSVLSRSSYEVEEYRNQHEITISGVKVPNPI
QQFDEANFPDYVMQSINSMGYKEPTPIQSQGWPIAMSGKNLVGIAQTGSGKTLAYILPAI
VHINNQPPIRRGDGPIALVLAPTRELAQQIQQVATDFGNAAYVRNTCVFGGAPKREQARD
LERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR
QTLMWSATWPKEVKKLAEDYLGDYQQINIGSLQLSANHNILQIIDVCQEHEKENKLNVLL
QEIGQSQEPGAKTIIFVETKRKVENITRNIKRYGWPAVCMHGDKTQQERDDVLYQFKQGR
ASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSQTKGTSYAFFTPSNSR
QAKDLVSVLQEANQVVNPQLQTMAERCGGGGGGWNRSRYGGGGGGRSGGTFKRGSFGRSN
GQGGAGHKRFNNDY
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgtccggaaattggagcaatagccgtgaaaacggtggttccaagtttgggagcgggggc
ggtagtcgattcggcagtagcggaggcggacgattcggcagtggtggaggaaatggagga
agtcgatttggaagcaatggcggtggcaatagcagattcgggggcggtggcggtaagaag
gaattttctggtggccagaacatgcgtcgtcctaactgggatagtctgacgttgcagcca
ttcaacaaagacttctataacccacatccatcagtgctaagtcgctcatcctacgaagtt
gaagaatacaggaaccaacatgaaatcactatcagtggagttaaagtccccaacccaatt
caacagtttgatgaagctaacttcccagactatgttatgcagagcatcaacagcatgggt
tacaaggaacctacacccattcagtcacagggctggcctatagctatgtctgggaagaac
ttggtaggaattgcccagactgggtcaggaaagaccttagcttatatcttgcctgctata
gttcatatcaataaccagcctcctatcaggcgtggtgatggcccaattgcccttgtcttg
gctccaactagggagttagcgcaacaaatccaacaagtagctactgattttggcaatgca
gcatatgtgcgcaatacgtgtgtatttggtggtgcaccgaaaagggaacaagctcgtgac
ttggaaagaggagttgagattgtgattgccacacctggaaggttaattgatttcctagaa
aagggtactaccaacttacagcgctgcacatatttggttttggatgaagctgaccgcatg
ttagacatgggttttgaaccccagatcaggaaaatcattgagcaaattcgtcctgacaga
cagactttaatgtggtctgcaacatggcccaaggaagtaaaaaaattggctgaagattac
ttgggagattaccagcagattaatattggatccctgcaactgtctgcaaaccataacatc
ctgcaaataattgatgtttgccaagaacatgagaaagaaaacaagttaaatgtactatta
caagaaattggacaaagtcaagagcctggagcaaagactataatctttgttgagacaaag
cggaaagttgaaaatattactcgaaatattaagaggtatggatggcctgcagtgtgcatg
catggagataagacacagcaagaaagagatgatgttttatatcagttcaaacaaggacgt
gccagtatactagttgcaacagatgttgctgccagaggattagatgttgatggtatcaaa
tatgtgatcaattttgattatcctaactcttctgaagactacattcaccggattggtaga
actgggcgctcacaaacaaaaggcacgtcttatgccttctttacaccgtcgaattcacgc
caagctaaagacctggtctctgtacttcaagaagccaaccaggttgtcaatccccaatta
caaaccatggcagaacgttgcggcggtggcggcggtgggtggaacaggagccgctatggt
ggcggcggtggtggccgcagcggtggtaccttcaaacgtggctcattcggaagaagtaat
ggacaagggggcgctggccacaagagatttaacaatgactattaa
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