Pectinophora gossypiella (pink bollworm): 126372723
Help
Entry
126372723 CDS
T09293
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 isoform X1
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
pgw
Pectinophora gossypiella (pink bollworm)
Pathway
pgw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126372723
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgw03041
]
126372723
Enzymes [BR:
pgw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
126372723
Spliceosome [BR:
pgw03041
]
Complex C
Other components
Step II factors
126372723
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_19
AAA_22
nSTAND3
T2SSE
Microtub_bd
Sigma54_activat
ABC_tran
AAA_30
Sigma54_activ_2
AAA_16
AAA_7
PhoH
ATPase
cobW
SRP54
AAA_33
AAA_23
Motif
Other DBs
NCBI-GeneID:
126372723
NCBI-ProteinID:
XP_049874537
LinkDB
All DBs
Position
14:complement(14218933..14347077)
Genome browser
AA seq
1197 aa
AA seq
DB search
MLEDDENLHRLEGTSGDAPGGLIIKKKENPGEFQFAKPSLLGLDKLAAAKRKQNRLISFQ
NDDEEAEGESASTSSKERKYRRHNEETPTYTGGISEQARERMLERLQRREKETKEKGVHN
STSEEKKSRSKDEEDDRYYRSRYDKDRKRDYDRKDKDRYRDSDRRDRDRNRRRDSERRDD
RDKDRKDRSERDSSRRSYYEPRFKDEPRTPSMKVLKPTDKTAWDDDDDDPRGTVRKSSWD
FPTPLPKDAGTSERSQRSDRGGRPMRDYKGRPYENTPRATPHKFASSRRGADVDDPEWEE
AEKKLDRAWYNMGEGETDESDPFAGTSAEYIARKEEQIVKRQNRKVSAQRQQIDKDNELW
ERNRMLTSGVVHAINVNNDLDEESVDRVHLLVHNIVPPFLDGRIVFTKQPEPVIPVKDPT
SDMAINARKGSALVKAFREQKERRKAQKKHWKLEGTKIGNIMGIQKEKEELEDGPTKEAY
KYAEHLDKEAQEPESKSDFVKKKSIGEQRRYLPVFAVREELMQVIRENSVVIIVGETGSG
KTTQLTQYLHEEGYSRLGMIGCTQPRRVAAMSVAKRVSDEMNTRLGDEVGYAIRFEDCTS
PSTVIKYMTDGILLREGLREPDLDHYCAIIMDEAHERSLSTDMLFGLLREVVARRSDLKL
IVTSATMDSTKFSTFFGNVPTFTIPGRTFPVETFFAKNVCEDYVDGAVKQALQIHLQPDD
GDILIFMPGQEDIEVTCEVLTERLGDLDSAPPLTVLPIYSQLPADLQAKIFQRAPPGQRK
CIVATNIAETSLTVDGIMYVIDSGYCKLKVYNPRIGMDALQIYPVSQANARQRAGRAGRT
GPGKAFCLYTQRQYQHELLASTVPEIQRTNLANTVLLLKSLGVEDLLAFHFMDPPPQDTI
LNSMYQLWILGALDGTGALTALGRQMAEFPLDPPQCHMLIVSAEMGCSAEVLIIVSMLSV
PSVFYRPQGREEEADSVKEKFQVPESDHLTLLHLYNQWKSNNYSSSWCTEHFVHGKAMRK
VREVRQQLKDILQQQRLPLVSCGTDWDTVRKCICSAYFQQAARLKGIGEYVNCRTGMPCH
LHPTSALFGLGNSPDYVVYHELMMTTKEYMHCVTAVDGRWLAELGPMFFSVKETNKSNRD
KRKEAAVHLQRMEEEMKAAEQKMVEDKKIRDQDVPVKQEIATPGLNTPRRTPHRLGL
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgttagaggacgacgaaaacttgcatcgtttagaaggtacgtcgggtgacgctcctggc
ggtttaatcatcaaaaagaaggagaaccctggtgaatttcagtttgcaaagccctcgtta
ctgggcttagataagctagcagctgctaaaagaaagcagaaccgtctcatatcgtttcaa
aatgatgatgaagaggccgagggcgaaagtgcctccaccagttctaaagagcgtaaatac
aggaggcacaatgaagaaactccaacatatactggtggtatatcagaacaagcaagggaa
cgcatgttggagcgattgcagagacgagaaaaggaaacaaaagagaaaggtgttcacaat
tcgacgtcagaagaaaagaaatcgcgttccaaggatgaagaagacgaccgttactatcgt
agcagatatgacaaagatagaaaacgtgactatgacagaaaagacaaggacaggtatagg
gatagtgataggagggatcgagacaggaatagaagaagagactcagaaagacgagatgac
agagacaaagataggaaagataggagtgaaagagacagctctagaagaagctactatgaa
cccagattcaaagatgaaccaagaactccgagtatgaaagtcttgaaacctacagacaaa
acagcctgggatgacgatgatgatgaccctaggggtacagtgcgtaaatctagctgggac
ttcccgactcctctgcctaaagatgcgggaacttctgaacgctctcagagaagtgacaga
ggtggacgtccaatgagagattataaaggacgaccgtatgagaatactcctagagctact
ccgcataagtttgcaagttcaagacgtggggccgacgttgacgacccagagtgggaagaa
gctgaaaagaaattagacagagcctggtacaatatgggagaaggagaaaccgacgagtca
gacccatttgccgggacatcagcagagtacatcgcacgcaaagaagaacagatagtgaag
cgacagaaccgcaaagtgtccgcccagagacaacagatagacaaggacaacgaactgtgg
gagcggaacagaatgctgaccagcggtgttgttcatgctatcaacgttaacaatgatttg
gatgaggaaagcgtagaccgggtacatctcctagtccacaacattgttcctcctttcctc
gacggcagaatcgtcttcaccaaacaaccggaacctgttatacctgtaaaagacccgacg
tcagacatggcaataaacgctcggaaaggctctgcgctggtcaaagcgttcagagagcag
aaggagcgcaggaaagcgcagaagaaacactggaagctagagggaaccaagatcggaaac
atcatgggcatacagaaggaaaaagaagaattagaagatgggcccactaaagaggcttat
aagtacgctgagcacttggataaagaggcccaagaaccggagtccaagtcagacttcgtg
aagaagaagtcgataggagaacagcggcggtacctgcccgtgttcgcggtcagggaggag
ctgatgcaggttatcagagagaacagcgttgttatcattgttggtgaaaccggcagcggc
aaaacgacccagctgacccaatacctgcacgaggaaggctacagtcgtctcggcatgatc
gggtgcacgcagccgcggcgcgtggccgccatgtcggtggccaagcgagtgtcggacgag
atgaacactaggctaggcgacgaagtgggctacgcgatccgcttcgaagactgcacgtcc
ccctctaccgtgatcaagtacatgactgacggtatcctgcttcgagaaggtctgcgcgag
cccgacctcgaccattactgcgccatcattatggacgaggcgcacgaacgctcgctgtct
acggatatgctgttcggattgctcagagaggtggtggctcgccgctcggacttgaagcta
atcgtgacgtcagcaaccatggactccaccaaattctccacgttcttcggcaacgtgccc
accttcaccatccccggacgcacgttcccggtcgaaacattcttcgctaagaatgtctgt
gaggactacgtcgatggcgctgttaaacaggctcttcagatccacctgcaacctgatgac
ggcgacattttgatcttcatgccaggacaggaagatattgaagttacttgcgaggtgcta
acggagaggctaggtgacctcgacagcgcgcccccgctcacagttctaccgatctactcg
caactcccagctgacttacaagcgaagatcttccagcgcgcgccgcccggacagaggaag
tgtatcgtggctactaatattgcagaaacctcgctgacggtagatggaattatgtacgtc
atagactcaggatactgcaagctgaaagtgtacaatcccaggattggtatggatgctctg
cagatctatccagtgagccaagctaacgcccggcaacgcgccggtcgcgcggggcgcaca
ggccccggcaaggcgttctgcctatacacgcagcgccagtaccagcacgagctgcttgcg
tccacggtgcccgagatacaacgcaccaacctggccaacaccgtgctgctgctcaagtca
ctcggcgtcgaagatctactcgccttccactttatggatccacctccgcaggacacgatc
ctgaactcgatgtaccagctatggatcctgggcgcgctggacggcacgggcgcgctgacg
gcactaggccgccagatggcggagttccccctcgacccaccgcaatgccatatgctcatc
gtgtccgcagagatgggctgcagcgctgaggtgttgatcattgtgtcaatgctgtcagta
ccatcagtgttctaccggcctcagggtcgcgaagaggaagcagattcagtgaaagagaag
ttccaagtgcccgagtctgaccacctcacgttacttcacttgtacaatcagtggaagtct
aacaactactcaagctcgtggtgcacggagcacttcgtgcatggcaaggcgatgcgcaag
gtgcgcgaagtgcgccaacaactgaaggacatcttacaacaacaacgcctgccgttagtg
tcttgcggcactgattgggacactgtgcggaagtgtatctgttcagcctacttccaacaa
gcagcgcgccttaaaggcataggcgaatacgtgaactgccgcactggcatgccgtgccac
ttacacccgacgtcagccttgttcgggctgggcaactcgccggactacgtggtctaccac
gagctcatgatgaccaccaaggagtacatgcattgtgtcaccgccgtcgacggccgctgg
ctggcggaactcgggcctatgttcttctccgtcaaggagaccaacaaatcaaaccgcgac
aaacgcaaggaagcagcagtacacctccaaagaatggaagaagagatgaaagccgcagaa
cagaagatggtagaagataagaagatcagggaccaagatgtgccggtcaaacaggagata
gccacgccggggctcaatactcctagacgcacgccgcacaggctagggctgtag
DBGET
integrated database retrieval system
