Pectinophora gossypiella (pink bollworm): 126373546
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Entry
126373546 CDS
T09293
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
pgw
Pectinophora gossypiella (pink bollworm)
Pathway
pgw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126373546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgw03019
]
126373546
03012 Translation factors [BR:
pgw03012
]
126373546
Enzymes [BR:
pgw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
126373546
Messenger RNA biogenesis [BR:
pgw03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
126373546
Translation factors [BR:
pgw03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
126373546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
HA2_N
OB_NTP_bind
nSTAND3
HA2_C
AAA_22
MRS2-like
RsgA_GTPase
AAA_19
Cas3-like_C_2
ABC_tran
nSTAND1
AAA_16
NACHT
Motif
Other DBs
NCBI-GeneID:
126373546
NCBI-ProteinID:
XP_049875623
LinkDB
All DBs
Position
16:7093099..7107716
Genome browser
AA seq
1083 aa
AA seq
DB search
MNRRRGKDNRRPLNAWDSRLHRGRGSGAPPGLRGKALGLYYRDRQKNLNLASYKVNFGLP
PAVENRVTVNLQKIIKLAARLNIPLAQSTFLDFQNEELNKSKTGTNAVDDDEFAMDVAIE
PKLSSAVKSSSLKDEKTSLNMSVESIHETEVFKAPNTTSNTTVENPGPSTSSTPDFIPIS
STEEDYGSGEPILSLRGGGDYKYGYQDIITGSFDEKLDECLAKGVSINLQTDEIKQINEE
LLNEYDEMIQKDKFRNLLKFRKTLPTYKKSEELLEVVKKNQVVVISGETGCGKSTQVPQL
ILDEAICDSRGANIHIIVTQPRRIAASSLATRVAEERGERLGNSTGYAVRLEKVDARPRG
SIMYVTTGVLLTDLEINQGLVNFSHVILDEVHERDCHIDFTMCMLKKVLKKRKDLKLILM
SATLDAEKLSEYFDGCPMLHIEGLAYPVEDIYLEDILLETNYQLPPVEDSRKRSQPHRGG
KRGFGNSSANMEKEIQFHAQTNELLNPVLKSRPELNKIRKTLIDPRIEELNPELIVALLQ
HICKGAPGAILVFLPGIGDITKLIYMMRDSQSFPSSLYEIYPLHSKLPSLEQHKIFERPP
EPVRKIIIATNIAETSITIDDIVYVIDCAKIKVRGLNVEENLSTLKNEWVAQANLRQRRG
RAGRCQAGICYHLVTSYRAATFAERLTPEIQRSDLLEEVLMIKRLRLGKALEAMTTLAEP
PATSTVEWAVKHLQQVGALDDKETLTPLGWHLARLPVHPSAGKLLLLGSLFGCLDRAASV
AAVWGFKDPFQLVIGKEKQAEYAKRALAEGEPSDHVAISEAILQWESCPREDRRSFAYDY
FLSRNTIELLSDMKRQFGDNLKQMGFLPSGNIKSSWENRNSNNLSLFKAVIAASLYPKVA
FVRWTNSRNPRKQKRVRVQLPIEKQKISVHPSSVVATNGPPRAEPICNNPGGNWMVYWLK
QRSTSLFLLEVTIVFTLPILFFGELMIKAREVPGQQDMCVLTVCSVDIFCKKKTANLIFQ
LRALLDQVLESKVMVSDDRGTNHSQFEETVLNAVVELITAEDERVDYYDDEDDSDRDSYS
QSY
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgaatagacgtaggggtaaggataacaggcgcccgctaaatgcttgggactcccgcctg
cacagaggccgcggcagcggggctccaccagggctaagaggcaaagcacttggcttatac
tacagagacagacagaagaacttaaacctagcgagttacaaggtaaattttggattacca
ccagcagtcgaaaatagagtgaccgttaatttgcaaaaaataatcaaactcgccgccaga
ttaaatataccgctagcacaaagcacattcctagatttccaaaatgaagaattgaataaa
tcaaaaactgggaccaatgctgttgatgatgatgagtttgctatggatgtggcaatagaa
cctaaacttagctcagctgtaaaatctagttcattaaaagatgaaaagactagcttaaat
atgtcagtagagagtattcatgaaacggaagttttcaaagcaccaaatactacttcaaac
acaacagtagaaaatcctggaccgagtacctcatctacaccagatttcatcccaatatcc
agtactgaagaggattacggttctggtgaacctatactctctttgagaggtggtggggac
tataaatatggatatcaagacattataactggatcttttgatgaaaaactagatgaatgc
ctagccaaaggtgttagtattaacctacaaacagatgaaattaaacaaatcaacgaagaa
cttcttaatgaatatgatgagatgatacaaaaggacaagtttcggaatttgttgaagttt
cggaaaactctacccacatacaaaaagtcagaggaactccttgaagtggtaaagaaaaac
caagttgttgtaatcagtggggagacgggctgcgggaaatctacacaggtgccgcaactg
attttagacgaggctatatgcgacagtagaggtgccaatatccatataatagtgacccaa
ccgcgacgcattgcagcttcgtccttagcaactagagtggctgaagagagaggagagcga
cttggtaattcgacaggatatgctgttagactggaaaaggtagacgcccgaccccgcggc
agtatcatgtacgtcacaactggggttctcctgacagacctggagataaaccaaggcttg
gtcaacttcagccacgtgattctagacgaggtgcacgaacgggactgccacattgacttt
actatgtgtatgttgaagaaggtgctcaagaagcgtaaagacctaaaattaatcctgatg
agcgcaacgcttgacgctgagaaactgtcagaatacttcgatggttgtcccatgttacat
attgaaggccttgcatacccagttgaggatatatacttggaagacatcctgctcgaaacg
aattaccagctgccgcccgtagaagactcacgaaagcggtcccaaccacacagaggtgga
aagagaggtttcggaaattcttcagccaatatggagaaagaaatacaattccacgctcaa
acaaacgagctgctaaatcctgtgctgaaaagcagaccagaattgaataaaatacgaaaa
acactaatagacccaagaattgaagaattaaaccccgaattaatcgtggccctcctccag
cacatttgcaaaggtgccccgggggccatcttagtgtttctaccaggaataggcgatatt
acaaaactgatttatatgatgcgggatagccaaagtttcccgtcttctctgtatgaaata
tacccgttgcattcgaagctaccgtccttggaacagcacaagatcttcgagaggcctcca
gagcccgtgaggaagattataatagccacaaatattgctgagacttcaataaccatagat
gacatcgtgtatgtcatcgattgcgccaagattaaggtcagagggctgaatgtggaggag
aatctgtccaccctaaagaatgagtgggtcgcgcaggctaatttgcgtcaaagacgaggt
cgcgccggtcgctgccaggccggcatttgctaccacctggtgacgtcataccgcgccgcc
actttcgctgagcgtctcacgccagaaatacaaagaagtgaccttctagaagaagtgctg
atgattaagaggttgaggctaggcaaagctttagaggctatgacgacattggctgaacca
cccgctacttccactgttgaatgggccgttaaacatttgcagcaagtgggtgctctagac
gacaaagagacgctgacccctcttggatggcatctggctcgtctgcctgtgcacccttca
gcggggaaactgctgttattaggatccctgtttggatgcctcgaccgagccgcgagtgtc
gcagccgtttggggatttaaagaccccttccagcttgttattggcaaagaaaagcaagcg
gaatacgcaaaacgcgcgctagcggaaggcgagcccagcgaccatgtggccatatccgaa
gccatactccagtgggaatcatgcccaagggaagaccgccggtcattcgcctacgactac
tttctatccaggaataccatagaattactgtcagatatgaagaggcaattcggggataat
ctcaagcaaatgggattcttaccctcaggcaacattaaatcgtcgtgggagaacaggaat
agtaataacttaagtctgtttaaagcggtcatcgcagcgtcgctgtaccctaaagtggct
tttgtcagatggaccaactcccgcaaccctcgaaaacaaaaacgggttagggtccaactt
cctatagaaaaacaaaagatatctgtgcacccgagtagcgtggtggctacgaatggaccg
ccgagagctgagccaatatgtaacaaccctggcgggaactggatggtctactggctgaag
caacggtctaccagcctgttcctgcttgaagttaccattgtcttcactctcccgatattg
ttctttggagaattgatgattaaagctcgcgaagtacctgggcaacaagatatgtgcgta
ttgactgtatgctccgtcgatattttttgcaagaagaaaactgccaatttgattttccaa
cttagggctctgttggaccaggtcctagagtccaaagttatggtatccgacgaccgtggg
accaaccacagtcagtttgaagaaaccgttttgaacgctgtggtagagttgatcacggca
gaagacgaacgcgtagattactacgatgatgaagacgattcagatcgggactcttattca
caaagttattaa
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