Pectinophora gossypiella (pink bollworm): 126373605
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Entry
126373605 CDS
T09293
Name
(RefSeq) pre-mRNA-processing factor 6
KO
K12855
pre-mRNA-processing factor 6
Organism
pgw
Pectinophora gossypiella (pink bollworm)
Pathway
pgw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126373605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgw03041
]
126373605
Spliceosome [BR:
pgw03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
126373605
Complex C
U5 SnRNP specific factors
126373605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP1_N
TPR_14
TPR_19
HAT_PRP39_N
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_16
HAT_Syf1_CNRKL1_C
TPR_17
FAT
ARM_TT21_2nd
TPR_21
TPR_CcmH_CycH
TPR_12
Motif
Other DBs
NCBI-GeneID:
126373605
NCBI-ProteinID:
XP_049875747
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Position
16:complement(5635533..5648358)
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AA seq
929 aa
AA seq
DB search
MSVPPQAFVNKNKKHFLGIPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAPPA
AKRKKTEEEDDDEDLNDSNYDEFSGYSGSLFSKDPYDKDDAEADAIYESIDKRMDEKRKE
YREKRLKEDLERYRQERPKIQQQFSDLKRELKSVSEDEWAAIPEVGDARNRKQRNPRAEK
FTPLPDSVLSRNLGGESATSIDPGSGLASMMPGVMTPGMLTPSGDLDLRKIGQARNTLMN
VKLSQVSDSVSGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSVRETNPNHPPAW
IASARLEEVTGKMQSARNLIMKGCEINPSSEELWLEAARLQPPDTARAVIAHAARNLPHS
VRIWVKAADLEQEIKAKRRVFRKALEHIPNSVRLWKAAVELENPEDARILLSRAVECCPT
SVELWLALARLETYENARKVLNKARENIPTDRQIWVTAAKLEEAHGNTHMVEKIIDRAIT
SLSANGVEINREHWFKEAMEAEKSGAVHTCQAIIRAVIGTGIEPEDQKHTWMEDAEACAN
EGAYECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLEALLQRAVAHCPKSEVLWL
MGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENKEYDRARRLLAKARASA
PTPRVMIKSAKLEWALNNLDVALNLLEEAIKVFGDYPKLHMMKGEIEEQMGKDDDAHNTY
TQGLKKCATSVPMWILLSKLEEKLKHVTKARSVLEKARLRNPKNPELWLESVRLERRNAS
AEIANAVMAKALQECPTAGRLWAEAIFMEPRPQRKTKSVDALKKCEHDAHVLLAVSQLFW
TERKINKCREWFNRTVKIDADLGDAWAYFYKFELLHGNEQQQEDVKSRCKAAEPHHGEYW
CKVSKDIANWCFNPEQILLLVAKNLPVPT
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgccaccgcaagcatttgtaaataagaataagaaacatttcctggggatccca
gctcccttaggttatgttgctggtgttggtagaggtgctacgggttttacaacaagatct
gatattggtccagctcgagatgctaatgatgtttctgatgaccgacacgccccaccagct
gctaaacgcaagaaaactgaggaagaggatgatgatgaggacttgaacgactccaactac
gatgagttctcagggtatagtggctcattgttctctaaagatccttatgataaagacgat
gcagaagccgacgccatttatgaatcaattgacaaaagaatggatgagaagaggaaagag
tacagagagaaacggcttaaggaggatttggagagatatcgtcaagaaagaccaaaaatt
cagcagcaattctcagacctgaaacgagagctgaagtcagtatcggaggatgaatgggcc
gccatccctgaggtgggcgatgcgaggaacagaaagcagaggaaccctagagcggaaaag
ttcactccactgccagacagtgtgctatccagaaacctgggtggagaatctgctacatct
atagaccctgggtctggtctggcgtctatgatgcctggcgtcatgaccccaggaatgctg
acaccttcaggggatttggatctaaggaagataggtcaagccagaaacactctgatgaac
gtgaaactgtctcaagtatcggactcagttagtggtcaaacagtggttgatcctaaaggc
tacctcacagacttgcagtccatgatacctacctacggaggagacatcaatgacataaag
aaagcaagattgcttctgaagtctgttcgggaaactaatcctaatcatccacctgcttgg
attgctagtgccagattggaagaagtcacaggtaagatgcagtcagcgcgtaacctgata
atgaagggttgcgagatcaacccgagctccgaggagctgtggttggaggcggcgcggctg
cagccgcccgacacggcgcgagccgtcatcgcgcacgccgcgcggaacctgccgcatagt
gtgcgcatatgggtgaaggcggccgacttggagcaggagattaaggcaaaacgccgcgta
tttcgcaaagcgttggaacatattccaaactcagttcgattgtggaaagcagcagtagag
cttgaaaacccggaagacgctcggatactcctctccagggcagtggagtgttgtcctact
agtgtggaactgtggctcgctttggctcggcttgagacgtatgagaatgcgaggaaagtg
ctcaataaagcgcgcgagaacattcctactgatcggcagatttgggttaccgctgctaag
ttggaagaagctcatggtaacacccacatggtggagaagatcatagaccgtgctatcaca
tcgctgagcgctaatggagtggaaatcaacagagaacactggttcaaagaggctatggag
gctgagaagtctggagccgtgcatacttgtcaggctataattcgagcggtcatcggcact
ggcattgaacctgaggatcagaaacacacttggatggaagacgccgaagcgtgcgcaaac
gaaggcgcgtacgagtgcgcacgcgcggtgtacgggtacgccctctccgtgttcccgtct
aagaagtccatctggctgcgggcggcgtacttggagaagcaacacggcaccagggccagc
ctggaggcgttgctgcaacgggccgtggcgcattgccccaagtctgaggtgctgtggctc
atgggggccaagtccaaatggttggcaggcgacgttccagccgcccggggtatcctctca
ctggccttccaagcgaaccccaactcagaagaaatctggttggcagctgtcaagctggag
agcgagaacaaagagtatgacagagcgagacgactgctggctaaagctagagcatctgcc
cctacgcctagggtgatgataaaatcagcaaaactagaatgggcgcttaataatttagac
gtggcgctaaatctgctggaagaggcaatcaaagtgttcggcgactatcctaaactgcac
atgatgaagggagagattgaggaacaaatgggcaaggatgatgacgcgcataacacgtac
acgcaagggttgaagaaatgcgcaacgagtgtgcccatgtggatattgctatcaaaactg
gaggagaaactaaaacatgtaacgaaagctagatctgtcctggaaaaggcgagactcagg
aatccaaagaatccagaattatggttggagagcgtgcggctagagcggcggaacgcgagc
gcggagatagcgaacgccgtgatggcgaaagccctgcaggagtgtcccacggccggccgc
ctgtgggccgaggccatcttcatggagccccggccgcagaggaagactaagagtgtggac
gccctgaagaagtgtgagcacgacgctcacgtgctgctggcagtatcccagctgttctgg
acggagaggaagatcaacaagtgtcgcgagtggttcaaccggactgtaaaaatcgacgcg
gaccttggcgacgcgtgggcttacttctacaagttcgagttgctccacggcaacgagcag
caacaggaagacgtgaagtctcgctgcaaagccgccgaaccacaccacggggagtactgg
tgtaaggtctccaaggacatcgccaattggtgcttcaatccagaacagatactactgctg
gtcgccaagaacctccccgtgccgacgtag
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