Pectinophora gossypiella (pink bollworm): 126374709
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Entry
126374709 CDS
T09293
Name
(RefSeq) cleavage and polyadenylation specificity factor 73 isoform X1
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
pgw
Pectinophora gossypiella (pink bollworm)
Pathway
pgw03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pgw00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126374709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgw03021
]
126374709
03019 Messenger RNA biogenesis [BR:
pgw03019
]
126374709
Transcription machinery [BR:
pgw03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
126374709
Messenger RNA biogenesis [BR:
pgw03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
126374709
U7-dependent histone pre-mRNA processing factors
126374709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Lactamase_B_2
Lactamase_B_3
Gp58
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
126374709
NCBI-ProteinID:
XP_049877389
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All DBs
Position
17:14497273..14515433
Genome browser
AA seq
686 aa
AA seq
DB search
MTTNPRKGTDPVLMEESDQLTIRPLGAGQEVGRSCIMLEFKGKKIMLDCGIHPGLSGMDA
LPFVDLIEADEVDLLLISHFHLDHSGALPWFLTKTSFKGRVFMTHATKAIYRWLVSDYIK
VSNISTEQMLYTESDLENSMDRIETINFHEEKDVRGVRFWAYNAGHVLGAAMFMIEIAGV
KILYTGDFSRQEDRHLMAAEIPTVHPDVLITESTYGTHIHEKREERESRFTGLVSDIVTR
GGRCLIPVFALGRAQELLLILDEYWSLHPELQDIPIYYASSLAKKCMAVYQTYINAMNDR
IRRQIAVNNPFVFRHISNLKGIDHFEDIGPCVIMASPGMMQSGLSRELFESWCTDPKNGV
IIAGYCVEGTLAKTILSEPEEITSMSGQKLPLKMSVDYISFSAHTDYQQTSEFINILKPP
HVVLVHGEQNEMSRLKAALQREHRGRLAIHTPRNTQQLALTFRGDKTAKVMGSLAMEPPE
PGRHLQGILVKRNFNYHILAPADLNKYTELSQSEVTQRQSIHYAGSPALLRHVVMQLAGN
VEFLSETRWRIYSCVDLTLENNIITLEWQAQPVSDMYADALVAGVLAASALPAPRHLPLA
PKLDRMHFKECVIEMLQEMFGEDSVPKMFKGDKLYVTVGDKRADIDLLSMEVSCPEDEGF
ERTVHTAISKLYAALAPVKPPPPPSS
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgaccactaatccaagaaaaggcaccgatccggtgcttatggaggaaagtgaccaactt
acgataaggcctttaggcgctggtcaagaagtaggcagatcatgcatcatgttggagttc
aaagggaaaaagattatgctggactgtggcatccaccctggtctatcaggaatggatgcc
ctgccttttgtggacttaatagaggctgatgaagtggatctgctgctcatatcacatttc
catttagaccacagtggtgctctgccatggttcttgacgaagacctcattcaagggccgt
gtgttcatgactcatgcaaccaaggctatctatcggtggcttgtctcagactacattaaa
gttagcaacatatcaacagaacagatgttgtacactgagtctgacctggagaactcaatg
gaccgcatcgagaccatcaacttccacgaggagaaggacgtccgtggtgtccggttctgg
gcatacaacgccggacacgtgctgggagctgccatgttcatgattgagatagctggagtt
aaaatcctgtatactggtgatttctcaagacaagaggaccggcatttgatggcggcggaa
ataccgacagtgcatcccgatgtcctgattacggagtcaacatacggcacacacatccac
gagaaacgcgaagagcgcgagagtcggttcactggtctggtcagcgatattgtgacgagg
gggggccgatgcctcatacccgtgttcgctttggggcgagcacaggagttgctgcttata
ttggacgaatactggtccctgcaccctgagctgcaggacatcccgatctactacgcgtcc
tcgctggccaagaagtgcatggcggtgtaccagacgtacatcaacgctatgaacgaccgc
atccgccgccagatcgccgtcaacaaccccttcgtcttccggcacatatccaatctaaag
ggcatagaccacttcgaggacataggtccgtgcgtgatcatggcgtcacccggtatgatg
cagtcgggcctctcccgcgagctgttcgagtcctggtgcaccgaccctaagaacggtgtc
attatcgctgggtactgcgtggaaggcacgctggccaagacgatcctgtcggagccggaa
gagatcacctccatgtccggtcagaagctgccgctcaagatgtccgtggactacatctcc
ttctccgcgcacacagactaccagcagacctccgagttcatcaacatcttgaagccgccg
catgttgtgctggtccacggcgagcagaacgagatgtcccggctgaaggcggcgctgcag
cgcgagcaccgcggccgcctcgccatccacacgccgcggaacacgcagcagctggcgctc
accttccgcggggacaagaccgccaaggtgatgggttcactagccatggagcccccggag
ccggggcggcatctgcagggcatcctcgtcaagaggaacttcaactaccacattctggcg
ccggcagacctcaacaaatacacagagttaagtcaatcggaggtcacacaacgccagtcc
atccactacgcgggctcgcctgccttactgcgccacgtggtgatgcaactagcaggcaac
gtggagttcctcagcgagacacgctggaggatctactcgtgcgtcgacctcacactagaa
aacaacatcatcacactcgagtggcaggcgcagccggtgtcggacatgtacgcggacgcg
ctggtggcgggcgtgctggccgcgtcggcgctgcccgcgccgcgacacctgccgctggcg
cccaagctggaccgcatgcacttcaaggagtgtgtaatagagatgctgcaagaaatgttc
ggggaggattccgtgcccaagatgttcaagggggacaagctgtacgtgactgtgggtgac
aagcgagccgacatcgacctgctcagcatggaggtatcctgcccagaggacgaaggcttc
gagcgcaccgtccacaccgccatcagcaagctgtacgcggcgctggcgcccgtcaagccg
ccgccgccgcccagctcctga
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