Pectinophora gossypiella (pink bollworm): 126374720
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Entry
126374720 CDS
T09293
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
pgw
Pectinophora gossypiella (pink bollworm)
Pathway
pgw03022
Basal transcription factors
pgw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pgw00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126374720
09124 Replication and repair
03420 Nucleotide excision repair
126374720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgw03021
]
126374720
03400 DNA repair and recombination proteins [BR:
pgw03400
]
126374720
Transcription machinery [BR:
pgw03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
126374720
DNA repair and recombination proteins [BR:
pgw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
126374720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
126374720
NCBI-ProteinID:
XP_049877411
LinkDB
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Position
17:complement(14515783..14524360)
Genome browser
AA seq
482 aa
AA seq
DB search
MSESSKSKSSLNLNPSPTLQCKDLHEYLKSRSAQFLETLYNYPTICLAVYRELPELARHF
VIRLLFVEQPVPQAVVASWVSQAYAKEQSKACEALSELSVWQEAPIPGGLPGWILAQSFK
KNLKVALLGGGRPWSMSSSLEPDGKARDVAFLDAYALERWECVLHYMVGSAQTEGISADA
VRILLHAGLMTRDAEDGSAVITRAGFQFLLLSTAKQVWLFLQHYLHTAEKRSLSAAECLA
FLYQLSFSTLGKDYSTEGMSNNMLVFLQHLREFGLVYQRKRKAGRFYPTRLALNITCVRD
GAALVAPLEPGAARGARGYILVETNYRVYAYTQTNLQVALLGLFTELIYRFPNLVVGVLT
RESVRQALRGGITAEQIIHYLEQHSHPQMLKSETGGIRSSSRLPPTVVDQVRLWESERNR
FTYTEGVVYNQFLSQADFVVLRDYARQQGVLTWQNERSRTMVVTRQGHDDVKKFWKRYSK
SS
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagtcttctaaatctaagtcttcattgaacctcaacccgtctccaacattgcaa
tgcaaagatcttcatgaatatcttaagagccgttcggcgcagtttttagagactttatac
aactatcctacgatatgcttggcagtttacagagaattgccggagttggctcgacacttc
gtcatccgtttgctgttcgttgagcagccggtgccgcaggctgtggttgcttcctgggtg
tctcaggcctatgccaaagagcagtcaaaagcatgcgaggcactgtccgagttgtcggtg
tggcaggaggctcctatcccagggggcctgcccggctggatcctcgcacagtccttcaag
aaaaacctgaaggtggctttgttgggaggcggtcgtccatggagcatgtcatcctcattg
gagccagatggcaaggctcgggacgtggcgttcctggatgcgtacgcgctggagcgctgg
gagtgcgtgctgcactacatggtgggcagcgcgcagacggagggcatcagcgccgacgcg
gtgcggatactgctgcacgcggggctcatgaccagggacgcagaagacggttcggcggtg
ataactcgcgccggcttccaattcctactgctgagtactgctaaacaagtatggctgttc
ctgcaacactacctgcacacggcagagaagcgcagcctgagcgcggccgagtgcctcgcc
ttcctctaccagctcagtttcagcacgttgggcaaggattacagtacagagggtatgagc
aacaacatgctagtgttcctacaacacctgagagagttcggactcgtgtaccagaggaag
cgtaaggcgggccgcttctacccgacgcggctggcgctgaacatcacgtgcgtccgcgac
ggcgccgcgctggtggcgccgctggagcccggcgcggcgcgcggcgcccgcgggtacatc
ctggtcgagaccaactaccgcgtgtacgcctacacgcagaccaacctgcaggtggcgctg
ctgggcctctttacggagctcatctataggtttcccaatttagtggtaggtgtactaaca
cgagagtcagtgagacaagcgctgcgcggcggcatcacggcggaacaaattatacactat
ctggaacaacactcacacccacagatgctgaagtcagagacaggcggtatccgctcgtct
tcacggctgccgcccactgtggtggaccaggtgcggctgtgggagagtgagcggaaccga
ttcacgtacaccgagggcgtcgtctacaaccagttcctgtcgcaggcggacttcgtagtg
ctacgcgactacgcgcgccagcagggtgtgctaacctggcagaacgagcgctcgcggacc
atggtggtcaccaggcaggggcacgacgacgtcaagaagttctggaagagatactccaag
agctcgtag
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