Pectinophora gossypiella (pink bollworm): 126375326
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Entry
126375326 CDS
T09293
Name
(RefSeq) exosome complex component RRP46-like
KO
K12590
exosome complex component RRP46
Organism
pgw
Pectinophora gossypiella (pink bollworm)
Pathway
pgw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126375326
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgw03019
]
126375326
Messenger RNA biogenesis [BR:
pgw03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
126375326
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
126375326
NCBI-ProteinID:
XP_049878226
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All DBs
Position
18:1232108..1234990
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AA seq
221 aa
AA seq
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MGVEDTNMKEYKLKPMKCEFNYLSKSDGSAILSQGNTVALVSVNGPLDIKMQSQSIEKTT
LEVLFTSKSGKPSVADRYKENAIRQTCETALLGCLYPRTGITITVQELEDYGGLIACSVN
CVCLALLNSGIAMRSVFAAVSCAITDVGNIVLDPTPEQVAAAHAQLSFVFDGRDRSLITA
FTEGTFSTAAYNEALERCRAGSELVLAFYRDIVGKYSAVIS
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgaagacacaaatatgaaggagtacaagctaaagcccatgaaatgcgagttc
aattacctaagtaaatcggatggttcggctattttgtctcaaggcaacactgtagcttta
gtgagcgtcaatggcccactggacatcaagatgcagagccagagcatagagaagaccaca
ctcgaggtgctgttcaccagtaaaagtggaaaaccttcagtcgctgatagatacaaagag
aatgcaatacgtcagacgtgcgagacagctttgttgggatgcttgtaccctcgcaccggg
atcaccatcactgtccaagagctggaggactatggagggcttatagcgtgtagtgtgaac
tgcgtgtgcctggctctgttaaactcggggatcgccatgcggtcggtgttcgcggcagtg
tcatgcgcgatcacggatgtaggcaacatagtgctggacccgacgccggagcaggtggca
gcggcgcatgcgcaactcagcttcgtcttcgatggcagggaccggagtcttattactgcg
ttcacagaaggcacgttcagcacagcggcgtacaacgaagcgttggagcggtgtcgcgcc
ggcagcgagctggtgctcgccttctaccgggacatcgtagggaagtactctgcagtcatc
tcctga
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