Pectinophora gossypiella (pink bollworm): 126375491
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Entry
126375491 CDS
T09293
Name
(RefSeq) transcription factor SOX-5
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
pgw
Pectinophora gossypiella (pink bollworm)
Brite
KEGG Orthology (KO) [BR:
pgw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgw03000
]
126375491
Transcription factors [BR:
pgw03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
126375491
BRITE hierarchy
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
126375491
NCBI-ProteinID:
XP_049878402
EnsemblRapid:
LOC126375491
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Position
19:complement(3552773..3967038)
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AA seq
536 aa
AA seq
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MSSKRKSPPSKLQEGGADKPEAGPANLDFPESHESDDQQNYYKFSPSSSTRSSISEEETY
DEERPSKKQRFENIDMTNNLLVPSSFLSLHQVNDLQARRRGSSECSSPGADAKVLGLCNN
NNSLLNHNSALSLNPHKRSMDDVLKRLTSKMNNSTIKEEDRKRPTPSTTPVKQNNDRRGV
LDAAALQALAGESVLEKERQLSEMILQLQMVREQLLAQQEHAKNIGNVQAELELQRLQQE
QLRRQELVRRGQHGLYPGPPLALLPLLEQMRPQAQAPQNAMQPSPWPATAQLAQLTASAR
SSPPPDPDAPLNLSKQRSPSPAQPSIMLPRFVPYPPIEEGQYSMQKEDDFNAACNTSSWG
QSPQEDSDKAKIVRQPKRDEAGKPHIKRPMNAFMVWAKDERRKILKACPDMHNSNISKIL
GARWKSMSNSEKQPYYEEQSRLSKLHMEKHPDYRYRPRPKRTCIVDGKKMRISEYKNLMR
TRRNEMRQLWCRDGGSELGFLPTLSSPGPSNTSPPPNGGNYMNPAFSPPLSPREDD
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctaaacgaaagtcgccaccgtcgaaattgcaagagggtggagcagacaagcca
gaggcagggcctgccaacctggacttcccagagagtcacgaatctgacgaccagcagaac
tactacaaattctcccccagctcctcaaccagaagctccataagcgaagaggaaacctac
gacgaagaacggccatcgaagaagcaaagattcgaaaatatagacatgacaaataacctt
ctagtcccatcatctttcctaagtcttcaccaagtcaacgacctccaggctcggagacga
ggttcctccgaatgcagcagtccaggtgctgatgcgaaggttttaggactctgcaataat
aacaattcgttgctgaatcacaacagtgctttgtctttgaatcctcacaagcggtcgatg
gatgatgtgctgaagaggttaacgtcgaagatgaacaatagtacgataaaggaggaggac
agaaagaggccgacgccatcgacgacgccggtgaagcagaacaacgatcgtcgtggagtc
ttggacgcggcggctcttcaggcgctggctggcgaaagtgtgctggagaaagagagacag
ctgtcagagatgatactacaactgcagatggtgagagagcagcttcttgcccagcaggaa
catgctaagaacataggcaatgtccaagccgagttggaactccaaagactgcagcaggaa
caactgcggagacaggagctggtgcggcggggccagcacggattgtatccaggccctccg
ctggcgctgctgccactactggagcagatgcggccacaggcgcaggcgcctcagaatgca
atgcaaccatccccgtggccggcgactgcgcagctcgcccagctgacggcgagcgcgcgc
tcgtcccctccccccgaccccgacgcgccgctcaacctgagcaagcagcgctcaccgtcg
cccgcgcagccctcgatcatgctcccgcggttcgtgccctacccgccgatagaagaagga
cagtactccatgcagaaagaggatgatttcaatgctgcttgcaacacatcatcatggggc
cagtcgcctcaagaggactccgacaaggctaaaatagttcgtcagccaaagcgcgatgaa
gctggtaaaccccacatcaagcgaccgatgaacgctttcatggtatgggccaaggacgag
cgcaggaagatcctgaaagcctgccctgatatgcacaactccaacatttcgaagatccta
ggagcgaggtggaaatccatgtccaattctgagaagcagccgtattatgaagaacagtcg
cggttgtccaaactgcatatggaaaagcaccctgattataggtaccgacctagaccgaag
cggacttgcatagtggacggcaagaagatgcgaatatcagagtacaagaatctgatgcgc
acgcgcagaaacgagatgcggcagctatggtgccgggacggtggcagcgagctgggtttc
ctccccactctttcgtctcccggaccatccaatacgtccccacctcctaatggggggaac
tacatgaaccccgcgttctctcccccactttcaccgagagaagacgattga
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