Pectinophora gossypiella (pink bollworm): 126375877
Help
Entry
126375877 CDS
T09293
Name
(RefSeq) CCR4-NOT transcription complex subunit 10
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
pgw
Pectinophora gossypiella (pink bollworm)
Pathway
pgw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126375877
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgw03019
]
126375877
Messenger RNA biogenesis [BR:
pgw03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
126375877
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_2
ANAPC3
TPR_14
TPR_16
TPR_1
ANAPC8
Elf-1_N
Calcipressin
Motif
Other DBs
NCBI-GeneID:
126375877
NCBI-ProteinID:
XP_049878910
LinkDB
All DBs
Position
20:3572048..3573922
Genome browser
AA seq
566 aa
AA seq
DB search
MATTNKDEPVVLAHQSFLKKDYAAALQHLNELETLVGNGNKRVQHNKAVVEFMSSDMKNV
DKLKKAVGQLTGVTFPDVEISDVSQPFLLYNYAVLLYHSRYYYQCTVLLEKVLASKNIKD
TKLLQQVTLLLMEATLCRRTYDKTLEVAKTHGEAIKSNNEVSELFERLVSRAQLLLGQKI
KLNLKPDSIENVFVIAQQQYLNGEVKEAANTLGQYKTLKYSYDLKSQGEDIWAAINNNLG
VIYLSIKKPFLASKYFQHAVKEHFKAMESEDSERLIACRDRPLYVYNLGLALLAANNSEG
AFECLVEAARHYPNNPRIWLHLAECCVKKCCSDEAQQFTVKKLGSGPHTRILLAKENKEK
YSSSGESFAIPSLSLEFAALCLRNAVTLLPNQDPPSDVNAPLIQAPPGPPINWKQRCELK
NSTFVLQSYVLLHLQDPLAALMSANELLSQSDASNSHKAWAHIYAAEALINLDRITDAVE
HLHPPMIHDLVSVLPYQMRDMIAVSVWAKAAVCHILRGDLVTARKILLQINSPRVLPLQM
YLEICTGNIDNCHTILRKLRFNSLSQ
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccactaacaaagatgagcctgtcgtcctcgctcaccagagtttcttgaagaaa
gattacgctgcagctctgcaacaccttaacgaattggaaaccctcgttggcaatgggaac
aaacgcgttcagcataacaaggctgtagtggaatttatgtctagtgatatgaagaatgtg
gataagctcaagaaagccgtcggtcagctgacgggggtgacatttccagacgtcgaaata
agcgatgtctcccaaccctttcttttgtataattacgctgttctactgtaccattctcgg
tattattatcaatgcacagtattgcttgaaaaggtactagcatccaaaaacataaaggat
accaaattgcttcaacaagttactctgttattaatggaagctactttgtgccgaaggact
tatgacaagactttagaagtcgctaagactcatggagaggcaatcaagtcaaataacgaa
gtgagcgaattatttgaaaggttggtcagccgtgcacagctgttgctcggccaaaagatc
aaattgaacttgaaaccggattccatagaaaatgtttttgttatagcacaacagcaatac
cttaatggagaagtaaaagaagctgctaatactctgggacagtataagactttgaaatac
agttatgatctaaaatctcagggtgaagatatctgggcagctataaataataaccttgga
gttatatatttatcaatcaaaaagcctttcttagcatctaagtactttcaacatgctgtt
aaagagcattttaaggctatggagagtgaagatagtgagaggctgattgcatgtagagac
aggccattgtatgtgtataatttgggcctggctttattagcagcaaataattctgaaggt
gcatttgaatgtttggttgaagctgcccgtcattatcccaataatcctcgaatatggctc
catctagctgaatgctgtgttaaaaagtgctgcagtgatgaagcacagcagttcactgtt
aagaaactaggcagtggtccacacacccgcatactcctcgcaaaggagaataaagaaaaa
tattcctcatcaggagaatcatttgctataccatccttgtctttagaatttgcagcgtta
tgtctgagaaatgctgtcactctgttgccgaatcaagacccaccatctgatgtcaatgct
cccctaatccaagccccacctggcccaccaattaactggaagcagcggtgtgaactaaag
aactctacttttgtccttcaaagttatgtactgttgcacttgcaggatcctttagctgct
ttgatgagtgcaaatgaactgttaagtcagagtgatgcatctaacagccataaggcgtgg
gctcatatatatgcagccgaggctctcattaatttagacaggataacagatgcagtggag
cacttacaccccccaatgatccatgaccttgtctcagtattaccatatcagatgcgggat
atgatagcagtgtcagtgtgggctaaagcagcagtttgtcatattttaagaggagactta
gtcacagcaagaaagattttgttgcaaataaactccccaagagtgctacccttgcagatg
tatttggaaatctgcacaggaaatattgataattgccacacaattctgaggaagcttaga
tttaacagtctatctcagtag
DBGET
integrated database retrieval system
