Pectinophora gossypiella (pink bollworm): 126375994
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Entry
126375994 CDS
T09293
Name
(RefSeq) ATP-dependent RNA helicase Ddx1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
pgw
Pectinophora gossypiella (pink bollworm)
Brite
KEGG Orthology (KO) [BR:
pgw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgw03041
]
126375994
03016 Transfer RNA biogenesis [BR:
pgw03016
]
126375994
Enzymes [BR:
pgw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126375994
Spliceosome [BR:
pgw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
126375994
Transfer RNA biogenesis [BR:
pgw03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
126375994
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
PGK
Motif
Other DBs
NCBI-GeneID:
126375994
NCBI-ProteinID:
XP_049879091
LinkDB
All DBs
Position
20:complement(5644046..5652603)
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AA seq
728 aa
AA seq
DB search
MTAFEEFGVLPELGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPI
LQIVWETLKDIQEGKTSKIIQQTSSEWTMSFFDRTDALAVTPDGLRCQSRDQQAWHGCRA
TKGVHTKGAYYYEATVTDEGLCRVGWSTQSAKLDLGTCRFGYGFGGTGKKSNAKQFDDYG
TAFGKNDVIGCMLNLNTGEIRYAKNGEDLGVAFKLDHSRKSDCYFPAVVLKNAEMSFNFG
TTPFKHTPPKDYVAICQAPKEYVKQNVVTAGAATDCKPVNNAPQAIIIEPSRELAEQTFK
QITKFKKYLENPQIRELLVVGGINVKDQINQLNAGIDIVVGTPGRLEDLIQGGYLALTHC
RFFVLDEADGLLKQGYGEMIERLHRQIPKITSDGRRLQMVVCSATLHAFEVKKMAEKLMH
FPTWVDLKGEDAVPETVHHVVCIVDPQKDRSWETLRKHVQTDSVHAKDNIRSGNMTPETL
SEAVKILKGEYVIRAIREHKMDRAIIFCRTKLDCDNLERYLVSFGSEFSCVCLHGDRKPK
ERQANLEKFKQGHVKFLICTDVAARGIDINGLPFMINVTLPDEKSNYVHRIGRVGRAERM
GLAISLVSSVPEKVWYHGEWCSSRGRNCWNTNLIDDRPKGCCMWYNEPQYLADIEDHLNI
TIQQVEPDLKVPSNEFDGKVVYGQKRKQTGSGYQDHVSQMAPVVRSLQELESQAQLYYLK
MHHNVTIA
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgactgccttcgaagaatttggagtgcttcccgaattgggaaaagcaattgaagagatg
gattggacgttgcctaccgacgttcaagctgaggctatacccctgattctcggtggagga
gacgtgttgatggcagctgaaaccggcagtgggaagactggtgctttctgtttgcctatt
ctgcagattgtatgggaaactctgaaagacattcaagaaggaaagactagtaaaattata
caacagacgtcgtccgagtggacgatgtctttttttgaccgtacggatgcgttggcagtg
actccagatgggctgcgatgtcagtccagggaccagcaggcgtggcacggctgccgcgcc
actaagggcgtgcacactaaaggcgcctattactatgaggcgacagttaccgatgaaggg
ttatgtcgtgttgggtggtccacacagagcgctaaattagacttaggaacctgcagattt
ggctatggatttggtggcacaggcaaaaagtccaatgctaaacagtttgatgattatggt
actgcttttggtaaaaatgatgtcattgggtgtatgttaaacttgaacactggtgagatt
cgttatgctaaaaatggtgaagaccttggtgtagcattcaaattagaccactcccggaaa
tctgactgctacttcccagctgtggttctgaagaatgccgagatgagcttcaatttcggt
accacaccttttaagcacacaccgccaaaggattatgttgccatctgtcaagccccaaag
gagtatgttaaacagaatgtagtaactgctggtgctgcaacagactgtaaaccagtcaac
aatgctccacaagctattattattgagccttctcgagagttagcagagcagaccttcaaa
cagatcaccaagttcaagaagtacctagagaaccctcaaatccgcgaactgttggtagta
ggaggcatcaatgtgaaggatcagatcaaccagcttaatgccggcatcgacatcgttgtc
gggactccaggtcgtttggaagatcttattcaaggaggttacctagctctcacccactgc
cgtttcttcgtgctggacgaggctgatggtctactgaagcagggctacggcgagatgatc
gagcgcctgcaccgacagatcccgaagatcacgtctgacggacgtcgtttgcagatggtc
gtctgctcagcaacgttgcatgcgttcgaagtcaagaaaatggcggaaaaactaatgcac
ttccccacgtgggtggaccttaaaggcgaggatgccgtcccagagacagtacatcacgta
gtgtgcatcgttgaccctcaaaaggaccgctcttgggagactttgcgcaagcacgtacaa
acagacagtgtacacgcgaaagacaacattcgcagtggtaatatgacgcccgagacgtta
tctgaagccgtgaagatcctcaaaggcgaatacgtcatcagagccatcagggaacacaaa
atggacagggcaataattttctgtcgcacaaagttggactgcgacaacttggagcggtat
ctggtgtcgttcggcagcgagttcagctgcgtctgcctccacggagaccgcaagcccaag
gagcgacaagccaaccttgagaagttcaagcagggacatgtcaagttccttatctgcact
gacgttgccgcacgaggcattgatatcaacggactaccttttatgattaacgtcactcta
ccagacgagaaatccaactacgtgcaccgcatcggccgtgtgggtcgtgctgagcgcatg
ggactcgccatcagtctcgtatcttctgttcctgagaaggtgtggtaccacggtgaatgg
tgctcttcccgaggccgcaactgttggaatacgaatctcatcgacgacaggcccaaagga
tgctgcatgtggtataatgaaccgcagtatctagcagacatcgaagatcatctgaacata
accatccagcaggtagaacccgacctgaaagtgccctccaacgagtttgacgggaaggta
gtgtacggtcagaagaggaagcaaaccggctctgggtaccaggaccacgtgagtcaaatg
gcgccagtggtgcgatcactacaggaactggaatcacaagcgcaactatactatctcaaa
atgcaccataatgtcaccattgcataa
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