Pectinophora gossypiella (pink bollworm): 126376196
Help
Entry
126376196 CDS
T09293
Name
(RefSeq) protein strawberry notch isoform X1
KO
K26273
protein strawberry notch
Organism
pgw
Pectinophora gossypiella (pink bollworm)
Brite
KEGG Orthology (KO) [BR:
pgw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pgw03036
]
126376196
Chromosome and associated proteins [BR:
pgw03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
126376196
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
126376196
NCBI-ProteinID:
XP_049879392
LinkDB
All DBs
Position
20:9908332..9948913
Genome browser
AA seq
1363 aa
AA seq
DB search
MSKRGGYGDDEDNPPTPSDDSDFDDDEDPDNLEVPGGGKTLAAAARMGDKVKVTSGPAPV
TIKPTTNPLAAASGLAFGQASNVKPIKIQASQLSKPINLGNLGNLAGLGRGGGAAGMAPP
PSPFAAGSSAAFNAASLLAQMDMVNMPGMNSYLLQNLNQILASGMGGPLAGMLGQFAQLP
TWGQPKTGMWHVDKAEEEEVDDEEMGVAETYADYMPSKLKLGRKHPDPVVETASLSSVEP
VDVTYKTSLPDETINRGLLSALQLEAVVYASQAHEHMLPDGTRAGFLIGDGAGVGKGRTI
AGIIFENYLKGRKRAIWVSVSNDLKYDAERDLRDIGAGKIEVHPLNKFKYAKLSSAVNGN
VKKGVVFSTYSALIGETQSSATKYRTRLKQLLQWCGEDFDGCIVFDECHKAKNLCPVGSG
KATKTGLTALELQNKLPKARVVYASATGASEPRNMAYMVRLGIWGEGTPFPTFMDFINAV
EKRGVGAMEIVAMDMKLRGMYIARQLSFHGVSFKIEEVPLSEQFKETYDKSVALWVEAMQ
RFTEAAELIDAESRMKKTMWGQFWSAHQRFFKYLCIAAKVNHAVITAREAVKCGKCVVIG
LQSTGEARTLDQLERDDGELSDFVSTAKGVFQTLVEKHFPAPDRNRINRLLGLEPTKAAK
PAPPVHNGSVKHEDEANTSKRKLTARQQVNAAAKRARGGSSSDEFVRGSDDELDLESDTE
RRAGSESELSDFNPFHGGSDSDDDPWVGRQKKKPLKKKKPTVPKKKASSTQDKIETMFER
KNSTPAPATVTVTAPGGHSLTGTPVGTNGLYLGPARNQPPPRSAIERACSMKEELLAAIE
RLGKRLPPNTLDQLVDELGGTENVAEMTGRKGRVVQTEDGQILYESRSEADVPLETLNLT
EKQRFMDGEKDVAIISEAASSGISLQSDRRARNQRRRVHITLELPWSADRAIQQFGRTHR
SNQVNAPEYIFLISDLAGERRFASTVAKRLESLGALTHGDRRATETRDLSQFNIDNKYGR
TALEAVMRAIMKYESPLVPPPRDYGGDFFQDVASALVGVGLIVNSETAPGVLSLDKDYNN
MSKFLNRILGMPVELQNRLFKYFTDTLTAVMEQAKRSGRFDLGILDLGSAGESVRRVRCV
RFLRRHATGRAPVELHAVHSERGMDWTEALEKWSEISGTKEGFYLSLQARNNKYTAVLAV
AVKITNKKEKLSKKDHMFQLYRPNTGLQLRLESLAELEKKYKKVSSEEAETSWRAQYAAS
TRVCSHAYWRNSCRNPDCEVGLRRRTYHVLAGSVLAVWARVEAVLAARSQLNKMQVVRIK
TDDGLKIVGTMIPKNCVEPLKEALSSDAVSVNEQTFEQADGLK
NT seq
4092 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaacgaggaggatatggtgacgacgaagacaacccacccacaccgtctgacgat
tcagattttgatgatgatgaagatcccgacaacttggaagtgccaggtggcggcaagacc
ctggcagcggcggctcgtatgggcgacaaggtcaaagtcacatcaggacccgcccccgtc
acaatcaaacccaccactaacccgctggctgctgcctcgggactagcattcggacaggct
tcaaacgtgaagccgatcaagatacaagccagccaactgagcaagccaatcaatttgggc
aacttgggcaacttagccgggcttggccgcggcggtggggcggctggaatggcgccgccg
ccgtcgccgttcgcggcaggctcctctgccgctttcaacgccgcttcgctgttggcgcag
atggacatggtgaacatgcctggcatgaactcgtacctgctccagaaccttaaccagatc
ctggcgtccggcatgggaggcccgctggccggcatgctgggccagttcgcacagctgccc
acctggggacagcccaagactggcatgtggcatgtggacaaggcagaagaagaggaagtt
gacgacgaagaaatgggagttgcagagacatatgcagactacatgccctcgaaattaaaa
ctcggccgcaaacatcccgatccggtggtagaaacagcgtccctgtcatccgtcgagccg
gtagacgtcacctacaagaccagtctacccgatgagacgatcaacagggggctcctgtca
gctctgcagttagaagctgtggtgtacgcgtcgcaagcacacgaacatatgttacctgac
ggaacacgcgctggattccttatcggtgacggcgctggtgtaggcaaaggccgcaccata
gcgggaataatctttgagaactacctgaaggggcgcaagcgcgctatatgggtctccgtg
tccaatgatctcaagtacgacgccgagcgcgacctgcgtgacatcggcgccggcaagatt
gaagtgcatcctttgaataagttcaagtacgcgaaactctcatcagcagtcaacggtaac
gtgaagaagggcgtagtgttcagcacatactcggctctcataggagagacacagtccagc
gccacaaagtacaggaccagactcaagcagctactgcagtggtgcggcgaggacttcgat
ggatgtatcgttttcgacgagtgtcacaaagcgaaaaacctctgccccgttgggtctgga
aaagccactaagacaggcttaactgccttggaactgcagaacaaactgcccaaggccagg
gtagtgtatgcctcagccacaggagcatcggagcctaggaacatggcgtatatggtacgg
ctcggcatatggggtgaaggaacgccttttcccactttcatggacttcatcaatgctgtg
gagaaacgaggcgtgggcgcgatggagatcgtggcgatggacatgaagcttcgaggaatg
tacatcgcgcggcagctgtccttccacggcgtctccttcaagattgaggaggtgcccctc
tctgagcagttcaaggagacttatgacaagtctgttgcgctgtgggtggaagccatgcag
aggttcacagaagctgcggaactgattgacgcagagtcacgcatgaaaaagaccatgtgg
ggccagttctggtcggcgcaccagaggttcttcaagtacctatgtattgccgcgaaggta
aaccacgcagtaataacggcgcgggaggcggtgaagtgcggcaagtgcgtcgtgatcggt
ctgcagagcacaggcgaggctcgaaccctggatcagctcgagagagatgacggagagctg
tctgacttcgtctctactgccaagggcgtattccaaaccctagtggagaaacacttcccg
gcgccggaccgcaaccgtatcaaccggctgctgggcctggagcccaccaaagctgccaag
cccgctccgcccgtgcacaacggcagcgtgaagcatgaagacgaggccaacacatccaaa
cgcaagttgacagctcgtcagcaagtgaacgcggcggcgaagcgtgcacgcggcgggtcg
tcgtcggacgagttcgtccgcgggtcggacgacgagctggacttggagtcggacaccgag
cgccgcgccggctccgagtccgagctgagcgacttcaaccccttccacggcggcagcgac
agcgacgacgacccgtgggtagggcgtcagaagaagaaaccgctcaagaagaagaaacca
acagttccaaagaagaaggcctcgagcacgcaggacaagatcgagacgatgttcgagcgc
aagaacagcacccccgcgcctgccaccgtgaccgtgacggcgcccggggggcacagcctc
acggggacacctgtcgggactaacggactgtatttgggtccggcccgtaaccaaccacca
cctcgatcggccatagagcgcgcgtgtagcatgaaggaggagttgctggcagccatcgag
cggctcggcaagcgcctgccacccaacacgctcgaccagctcgtcgacgaactcggcggc
accgagaatgtcgctgagatgacaggtcgcaaagggcgggtggtacagacggaagacggg
cagatcctctacgagagtcgttcggaagcagacgtgccgctggagaccctcaacctgacg
gagaagcagcggttcatggacggcgagaaggatgtggccatcatctcggaagccgcctcc
agcggtatctcgctgcagagtgataggagagcaagaaaccaaaggcgaagagtgcacata
acattagagctgccgtggtcggcagatagggctatacaacaatttggacgtacccaccga
tcgaatcaagtgaacgcaccggagtacatattcctgatatcggacctggcgggcgagagg
cgcttcgcgtccaccgtggccaagcggctcgagtcgctcggggcgctcacgcacggggac
aggcgcgccacggagacccgcgacctcagccagttcaatatcgacaacaagtatggtcga
acagcactagaagcagtgatgcgcgccataatgaagtacgagtcgccgctggtcccgccg
ccgcgcgactacggcggagacttcttccaggacgtagcctctgcgctggtcggcgtcggg
ctcatcgtcaatagtgaaactgcgcccggggtgctctcgctagacaaggactacaacaac
atgtccaagttcctgaacaggatactgggcatgccggtggagctgcagaacagactgttc
aagtacttcaccgacacactcaccgccgtcatggagcaagccaagcgcagcgggcgcttc
gacctgggcatcctggacctgggcagcgcgggcgagtcggtgcggcgcgtgcgctgcgtg
cgcttcctgcggcggcacgccaccggccgcgcgcccgtcgagctgcacgccgtgcactcc
gagcgcggcatggactggacagaagctctggagaagtggtctgaaatcagcggcaccaag
gagggtttctacctgtcgctgcaggctcgcaacaacaagtacacggccgtgctcgccgtc
gccgtcaagatcaccaacaagaaggagaagctctctaagaaggaccacatgttccagctg
tacaggccgaacacaggactgcagcttcgactggagtctctggcggagctcgagaagaag
tacaagaaagtgagcagcgaggaggcggagacctcgtggcgcgcgcagtacgccgcgtcc
acgcgcgtctgcagccacgcctactggcggaactcgtgtcgtaaccccgactgcgaggtg
gggctgcggcggcgcacgtaccacgtgctggcgggctcggtgctggccgtgtgggcgcgg
gtggaggccgtgctggccgcgcgctcgcagctcaacaagatgcaggtcgtgcgcatcaag
accgacgacgggctcaagatcgtgggtacgatgattccaaagaactgcgtggagcccctg
aaggaggctctatcatcggacgcggtgtcagtcaacgagcagacgttcgagcaggcggac
ggcctcaagtga
DBGET
integrated database retrieval system
