Pectinophora gossypiella (pink bollworm): 126376202
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Entry
126376202 CDS
T09293
Name
(RefSeq) Fanconi anemia group J protein homolog isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
pgw
Pectinophora gossypiella (pink bollworm)
Pathway
pgw03440
Homologous recombination
pgw03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pgw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
126376202
03460 Fanconi anemia pathway
126376202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgw03400
]
126376202
Enzymes [BR:
pgw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
126376202
DNA repair and recombination proteins [BR:
pgw03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
126376202
FA (Fanconi anemia) pathway
Downstream FA components
126376202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
T2SSE
Motif
Other DBs
NCBI-GeneID:
126376202
NCBI-ProteinID:
XP_049879402
LinkDB
All DBs
Position
20:complement(10995198..11080182)
Genome browser
AA seq
996 aa
AA seq
DB search
MSSPIQISDDDESFDQVDCDNRQTTRDIQEMVDISSDDGTDCEISDDDALPAVNLRGPRE
ISRSAVIRNIFPTKPQSNAIGNAPSTSTRVPEHVATSSGLAPQRTEPKIAGTVRSIGGVP
VRMPVEPYGCQVALMAKVITAIKQRKNCLLESPTGSGKTLALLCGALAWQQHETDTIAQS
QAQQLVQQHPELHQVSGAATYIASPPNKQFTPEKLFANTVFGERSIYDKPHHNSDGTNKR
PEPLNDPDCSGAGSSYNDEVKIHKRRRLNGSGDGSNTNSPSKLAADTTPQKLVAVTPEKT
INPVDAGTPPNVRALYHLVDQLQLRTSMTVNCRVPIIYYGARTHKQLQQVIKEFSRTAYC
GSAKMSILSSRDYSCIREFDRNLWTSKNDMCRGCIKGEVPLTDNSSMQTSARKKGESNCK
YFDNKLALTHDQLGPAFDLEDLLAAGREKDACPYYAARAMAMNAQIVFCPYNYLIEPSIR
SAMQIDLKDNILIIDEAHNIEDICRDAASFTITQENIQACILELEIATKYRYANQDAMSY
FDYLLNALKNWDQWFVNQQPWVINKPVNFNEAVHTWEVEEFTQTLNHHNIGEKQYPEFTN
AAEVLCRRLRENPQALKGVTQTTGTLIESLDTVLGYVFREQGKYKDDFKPALVRTVQGKT
ERHDARAGLWRTSEFNNSNRRGWVEKASLSLRLVCLNPGIVFAGLKSARCIVLSSGTLTP
LISLHSELDTHFPLCVSPKHVIPQDRIWIGTLTTCPDGQPLECTNNRTRLPALQDALGAS
ILWVSQVTPHGVLCFLPSYQLMTTLHTRWQETGLWRKLCDIKHVFMESRNVRDHNDNMDD
YYKYVGTSKGALLFAVYRGKVSEGMDFKDHQARAVITVGVPFPNMFDMSVKEKMKYNDKY
SSTRGLLSSREWLRVQAYRALNQAVGRCVRHRNDWGAVLLADSRFANPYYTEHLSKWVRS
FLGTNHHTYESLVNSPNSLESFMQNMTIRENEEEQG
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaccgatccaaatatccgatgatgacgagagtttcgaccaagtagactgtgat
aatcgtcagacaacgagagatattcaagaaatggtggatatcagcagcgatgatggcacg
gactgcgagatttcagatgacgatgctcttcccgctgtgaatttacgcggacctcgggag
atttctaggagcgctgtaataagaaatatatttcctacaaaacctcaaagtaatgccatt
ggaaatgcaccttcaacctcgaccagggttccggaacatgtcgcgacaagttcgggattg
gcgccccagcgcaccgagcccaaaatagccggcacagtgagaagtataggtggagtccca
gtacgaatgcccgtggagccttacggttgtcaagttgctcttatggccaaggtgataaca
gcaatcaagcagagaaaaaactgcttactggagagtccaacggggtccggcaagacattg
gcgttgctgtgtggagccctagcttggcaacaacacgagacagacaccatcgcccagtcg
caagcgcagcagttggtacagcaacatccagagctacatcaagtatctggcgccgcgacc
tacatcgcctccccgcctaacaagcagttcactccggagaagctcttcgctaacactgtc
tttggtgagaggagtatctacgacaagccacaccacaacagtgatggtaccaacaagcga
ccggaacctctgaatgaccccgattgtagtggtgcaggatcatcttacaacgacgaagtg
aagatccacaagcgacgtcgtcttaacggcagcggcgacggctccaacactaacagcccc
agcaagctggctgcggacaccactcctcagaaactggttgcggtcactcctgaaaagact
atcaacccggtagatgctggaacccctcctaatgttcgggcgctgtaccacctggtggat
cagctccaactcaggacatccatgaccgttaattgcagagtgccaatcatatactacgga
gccaggactcataagcagctgcagcaagttatcaaggagttcagcagaacggcctattgc
gggtccgcgaagatgagcatattgtccagcagggattacagctgtataagggagtttgac
aggaacctttggacctctaaaaatgatatgtgccggggatgtataaagggagaagttccg
ctcacggacaactcttcgatgcaaacttcagccaggaagaaaggggagagcaactgcaaa
tactttgacaacaaactggcgttgacccacgaccagctggggccggcctttgacctcgag
gatttgctagccgctggtcgagagaaggacgcgtgtccatactacgctgccagggccatg
gccatgaatgcacagatcgtcttctgcccctacaactacctcatcgagcccagcatcagg
agtgccatgcaaatcgacttgaaggacaacatcctgatcatcgatgaggcgcacaacatc
gaggacatctgccgcgacgctgcctccttcaccatcacacaggagaacatccaggcctgc
attctggagttggaaatagcaaccaaatatcgctacgccaaccaagacgctatgagctac
ttcgattatttgctcaacgctcttaaaaactgggatcagtggttcgtgaaccagcaacca
tgggttatcaacaagccggtaaacttcaacgaagctgtgcatacttgggaggtggaggaa
ttcacgcagaccctcaaccaccacaacatcggggagaagcagtatccagagttcacaaat
gcagcggaggtcctctgccgccgtctgcgtgagaacccgcaggcgctgaaaggggttaca
cagaccaccggcacactcatagagtctctcgacactgtacttggttatgtgttccgggag
caaggcaaatacaaggatgacttcaagccggcactcgtgcgcaccgtgcagggcaaaacg
gagcgacacgacgcccgcgccggtctgtggaggacctcggagttcaataatagcaatcgg
cggggctgggtggagaaggcaagcttatccttacgcctggtatgcctgaaccctggtata
gttttcgcgggtttaaagtcggcgcgctgcatcgtgctctcttcaggcacgctcacaccg
ctaatctcactgcactcggagctcgacactcacttcccgctgtgcgtgagccccaaacac
gtcataccgcaagatcggatatggataggcacactgacaacatgcccggatgggcagccg
ctggagtgtaccaataaccgcacccgcctgcccgccctgcaggacgcgctgggcgcgagc
atcctgtgggtgagccaggtcacgccgcacggcgtgctgtgcttcctgccttcataccag
ctcatgacgaccctgcataccaggtggcaagaaacaggtctgtggcggaagttatgcgac
atcaaacacgtgttcatggagagtaggaacgttagagatcacaacgacaatatggatgac
tattacaagtacgtgggcacgagtaagggcgcgctgctgttcgccgtgtaccgcgggaag
gtgtccgagggtatggacttcaaggaccaccaggcccgagccgtcatcacggtgggggta
ccattcccgaacatgttcgacatgtctgtgaaggagaagatgaagtacaacgacaagtac
agcagcacacgaggtctcctgtccagccgggagtggctgagggtgcaggcgtatagagcc
ctgaaccaggcggtggggcgctgcgtgcggcaccgcaacgactggggcgccgtgctgctg
gccgactcacgcttcgccaacccatactacacggaacatctctccaaatgggtgcgcagc
tttctgggcaccaaccaccacacgtacgagagtctagtcaacagccccaacagtctggag
agcttcatgcagaatatgaccatcagggagaacgaggaggaacagggatag
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