Pectinophora gossypiella (pink bollworm): 126376450
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Entry
126376450 CDS
T09293
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
pgw
Pectinophora gossypiella (pink bollworm)
Pathway
pgw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126376450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgw03019
]
126376450
Messenger RNA biogenesis [BR:
pgw03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
126376450
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
126376450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
126376450
NCBI-ProteinID:
XP_049879720
LinkDB
All DBs
Position
2:complement(6095854..6098591)
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AA seq
310 aa
AA seq
DB search
MAGLLLSPTEKVFILHGVQDDFRSDGRSNIDYRPLELETDVVSHASGSARLRLANTDILV
GVKTEIDVPKPDLPNLGKLEFFVDCSANATPEFEGRGGEQLASSISNMLQKAYHSSQAFN
LKQLCILEGKQCWKLYIDILILECGGNLCDAVSLAVKAALYNTRIPFVKAALMDGGNVDL
TLSDDPYDSKLLDVGTAPLLVTLCKIGDKCVVDPSAEEESCSVISLVVGITGNPRCYCDR
KDADKVPNLEGKCSTIAMNGAGSVAPKTLKDAIHQGIIAAKALDEALGDALIREQEEKVG
FKKHSYGFLK
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggccggcctgttgctaagtcctacagaaaaagtgtttatccttcatggtgttcaagat
gacttccgttcagatggcaggtcaaatattgactacaggccattggaactggagacagac
gtagtgagtcatgctagtggttcagcgcgactacggctagccaacacagacatcctcgtt
ggtgtaaaaacagagatagatgtgcctaaaccagacctgcccaacttaggaaagttagag
ttcttcgttgactgctcagcaaatgccactccagaatttgaaggtcgtggaggtgaacag
ctggctagcagcatatccaatatgctgcagaaagcataccactcctcacaggcatttaat
ctgaaacagctctgcatacttgagggaaaacagtgctggaaactttacattgacattttg
atactagaatgcggtggcaatttatgtgatgctgtatctttagcagtcaaagctgcactg
tacaacacgagaataccatttgtaaaagcagcacttatggatggaggaaatgtggatttg
accctctcagatgacccatatgatagtaagttgttggatgtgggcactgctcccctattg
gtaactctatgtaaaatcggcgacaaatgcgtggtggacccttcggcggaagaagagagt
tgcagtgtgatatcacttgtggtcggcatcacggggaaccctcggtgctactgtgataga
aaggatgcagacaaggtgcctaatctagaggggaagtgtagcacgatagcaatgaatggc
gctggcagtgtcgcgcccaagactttgaaagacgctatccatcaaggcattattgcagct
aaagctcttgatgaagcattgggagacgctttgataagagagcaggaagaaaaagtaggc
ttcaaaaaacattcctatggcttcctaaaataa
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