KEGG   Pectinophora gossypiella (pink bollworm): 126376486
Entry
126376486         CDS       T09293                                 
Name
(RefSeq) DNA ligase 1 isoform X1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
pgw  Pectinophora gossypiella (pink bollworm)
Pathway
pgw03030  DNA replication
pgw03410  Base excision repair
pgw03420  Nucleotide excision repair
pgw03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pgw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    126376486
   03410 Base excision repair
    126376486
   03420 Nucleotide excision repair
    126376486
   03430 Mismatch repair
    126376486
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pgw03032]
    126376486
   03400 DNA repair and recombination proteins [BR:pgw03400]
    126376486
Enzymes [BR:pgw01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     126376486
    6.5.1.6  DNA ligase (ATP or NAD+)
     126376486
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     126376486
DNA replication proteins [BR:pgw03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    126376486
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     126376486
DNA repair and recombination proteins [BR:pgw03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     126376486
   NER (nucleotide excision repair)
    Other NER factors
     126376486
   MMR (mismatch excision repair)
    Other MMR factors
     126376486
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C mRNA_cap_enzyme FERM_N_2 SOG2
Other DBs
NCBI-GeneID: 126376486
NCBI-ProteinID: XP_049879855
EnsemblRapid: LOC126376486
LinkDB
Position
21:complement(6151582..6172301)
AA seq 922 aa
MNNLNKLLKSCRIVVSLAKRPVFVEVNTRIYSKYSAIVFTHNLDHFVIRNMSQKSIKSFF
TITPKKTAEMKEETKDESPSSSPKKNDNTMINESPPVTNGKEKRTSRRQRLESSDEESQS
PKPTKRKSSPTSSEKKKNTKRQRIESSESEAGSPVKVEEKIEVKIEKTHQPKTYASPKSK
KTKATSTKDKISSSVEKKTLREKNEKTSPAKKSPTKLTVKEEISPTQKKIVPMSAFVKKE
NGVGEKKDGEVKKEGDRVPEEEYNPAKPKYHPIDDACWSKGEEVPYLALAKTLEAIEAIS
ARLKIVEILANFFRSVLALTPEDLLPCVYMCLNQLAPAYHSLELGMAETYLMKTIGQCTG
RTLAQVKSAAQKTGDLGLVAEQARATQRTMFTPPPLKARKVFAALKEVAHMTGQASVNKK
IAKIQSLYIACRNVEARYLIRSLEGKLRIGLAEQSVLQALAVATTLTPPGPNGVETLDAS
KGLSAEQLKAKIDEQALIIKTTYCECPNYELLVPALLQHGVQQLQQHCRLTPGIPLKPML
AHPTKGLHEVFNRFENQEFTCEWKYDGERAQIHVPAVPDNDTPDFSNAAVFSRNQENNTS
KYPDILRRLPTLLKPGVHSCVLDTEAVAYDVEKKQILPFQILSTRKRKDANEADIKVQVC
VFVFDLLYLNGRALVRQPLAERRALLKEHFHEVEGEWQFATSRDCTSMEEVQQFLDESIK
GSCEGLMVKMLQGENSRYDIARRSHNWLKLKKDYLEGVGDSIDAVVIGAYLGRGKRTGVY
GGFLLACCDGSGEEYQALCKIGTGFTDEGLKARAEELEPHIVSGPKSYYRFDASHTPDVW
FEPARVWEVRCADLSLSPAHRAAIGLVDPDKGISLRFPRFIRVRDDKTPEEATTAQQIAS
MYLAQDQVKNTGTKITNLDDFY
NT seq 2769 nt   +upstreamnt  +downstreamnt
atgaataacttgaacaaattactaaagtcatgtagaatagtagtatcacttgctaaacga
cctgtatttgtagaggtaaatacaagaatatattccaaatattcagcaatagttttcaca
cataatttagatcattttgttatcagaaacatgtctcagaagagtataaaatcgtttttc
actatcactccgaagaaaactgctgaaatgaaggaggaaacgaaggacgaatctccttca
agttctcctaagaagaatgataatacaatgataaatgaatcaccgcctgttactaatgga
aaagaaaagagaacttcaagaagacaaaggctagaaagtagtgatgaggagtcccagtca
cccaaacctacgaaaaggaagtcatctcctactagttctgaaaagaaaaagaacacgaag
cggcaaagaattgaaagctcagaaagtgaagcagggtcaccggtcaaggttgaggagaaa
attgaagtgaaaatagaaaagacgcaccaacctaagacatatgcatcaccaaaaagtaaa
aaaaccaaagcgacatcaacaaaagataaaatatcatcatcagtagagaaaaagacttta
cgagagaaaaatgagaagacaagtccggctaaaaaatctcctactaaattgactgtgaaa
gaagagatatctcctactcaaaagaagatagttcctatgagtgcttttgttaagaaagag
aatggagtgggtgagaagaaagatggggaagtcaagaaggaaggagacagagtaccagag
gaagaatataacccagcgaaaccaaagtaccatccgatcgacgacgcgtgttggtcaaag
ggcgaggaagtcccatacttagctctagccaagaccctagaagccatagaagcgatttca
gctcgactcaagatcgtggagatactggctaacttcttccgttcagtactagcactgact
cctgaagatttacttccttgtgtgtatatgtgcttgaatcagctggcaccggcgtatcat
agcttagagttgggtatggcagaaacctatctaatgaaaacgataggtcaatgtacgggg
cgcactctagcccaggtcaagagcgcggcacagaagacgggcgatctcgggctggtagcg
gagcaggcgcgtgctacccaacgaaccatgttcactccgccaccgctcaaagccaggaaa
gtcttcgctgctctcaaggaagtcgcccatatgactgggcaagcttcagtcaacaagaag
attgctaagatacagtccctgtacatcgcgtgtaggaacgtcgaagcaagatacttaatc
aggtcgctggaaggcaagcttcgtatcggcctggcggagcaatctgtgctccaagcgctg
gcggtggccacgacgctgacgcctcctggacccaacggcgtcgagacgttagacgcttcc
aagggattgtctgctgaacagctcaaggcaaaaatagacgaacaagctctgataataaag
acgacatactgcgaatgtccgaactacgagctgctggtgccggcgttgctgcaacacggg
gtgcagcagttgcagcaacactgccggctgacgcccggaataccgctcaagcccatgttg
gcacatcccaccaaaggactacacgaggtgttcaacagatttgagaaccaagagttcaca
tgcgagtggaagtacgacggagaacgcgctcagatccacgtcccagctgtacctgacaac
gacacaccagacttcagcaatgcagctgtattcagccgcaaccaggagaacaacacgagc
aagtacccggacatactgaggcgtctgcccaccctgctgaagccgggggtgcatagctgc
gtgctcgacacagaggctgtggcatacgatgtcgagaagaaacagatactgcccttccag
atcctatcaacccgtaaacgcaaggacgcgaacgaagcggacatcaaagtgcaagtgtgt
gtgtttgtgttcgacctgctgtacctcaacgggcgcgcgctggtgcggcagccgctggcc
gagagacgggctctgttgaaggagcacttccacgaggtcgaaggtgaatggcagttcgcg
acgtccagagactgcacgtcgatggaagaagtacagcagttcttggacgagtccatcaag
ggctcctgtgaggggctcatggtgaagatgctgcaaggggagaactccagatatgacatc
gcacgccgctcgcataactggcttaagctaaagaaagactacctggagggcgtgggcgac
agtatagacgcggtggtgatcggggcgtacctcggccgcggcaagcggactggggtctac
ggcgggttcctgctagcgtgctgcgacggtagcggcgaagaataccaagcgctttgcaag
atcggcacggggttcacagatgaggggctgaaggccagggctgaagagttggaaccgcac
atcgtatctgggcccaagtcttattataggttcgacgcgtcgcacacgccggacgtgtgg
ttcgagccggcgcgcgtgtgggaggtgcgctgcgcagacctgtcgctgtcgcccgcgcac
cgcgccgccatcgggctggtggaccccgacaagggcatctccttaaggttccccagattc
atacgtgttcgtgacgacaagacgccggaggaggcgacgactgcgcagcagatagcgtcc
atgtacctcgcgcaggaccaggtcaagaacactggtactaaaattaccaaccttgacgac
ttttattga

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