Pectinophora gossypiella (pink bollworm): 126376547
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Entry
126376547 CDS
T09293
Name
(RefSeq) non-canonical poly(A) RNA polymerase protein Trf4-1-like
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
pgw
Pectinophora gossypiella (pink bollworm)
Pathway
pgw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126376547
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgw03019
]
126376547
03016 Transfer RNA biogenesis [BR:
pgw03016
]
126376547
Enzymes [BR:
pgw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
126376547
Messenger RNA biogenesis [BR:
pgw03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
126376547
Transfer RNA biogenesis [BR:
pgw03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
126376547
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
PAP_NTPase
Polbeta
Motif
Other DBs
NCBI-GeneID:
126376547
NCBI-ProteinID:
XP_049879971
LinkDB
All DBs
Position
21:6173874..6214253
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AA seq
563 aa
AA seq
DB search
MDPAVAWYQPEQEGPAKRLWLRIWETQSEIERMNLKNLENANPNANKAQDFIPINDVNGE
NRNNNYFNPARRKMNDNRASTFNLNKNHDALIGEYGGCPWRVPNYAYKPGILGLHEEIEH
FYMYMSPTETEHLVRTTVVNRIRQAILTLWPQARVEVFGSFRTGLYLPTSDIDLVVIGQW
EKLPLWTLERELVGQDIAEKESIKVLEKATVPIVKMTDKYSDVKVDISFNMSSGVKSAEL
IKQYKEKYPCLSRLVMVLKQFLLQRDLNEVFTGGISSYSLILMCISFLQLHPRPERLRQP
QNLGVLLVEFFELYGRKFNYVKTAIRVKNGGSYVSKDDIQKEMNDGHRPSLLCIEDPLTP
GNDIGRSSYGAIQVKQAFDYGYIILQQAVAPHNVQLLARHSVLGRIVRVTDHVLQYRRWV
RDTFEPYFFPQRAPRRLRPSREPSPEPSDSDREWSDRCGSPARTSPPPLSALQCSSPTPR
RVSAHQSLIIHHITSNSDFNNIPSGVMQQRFGGGDNNTKSRTPRSFSSKQRRYTSPPAQP
RARADPPPRHNKKRRQYTQQPQR
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggatcccgccgtcgcgtggtatcagcccgagcaggaaggaccagcgaagcgcctgtgg
cttcgtatttgggaaactcaaagtgaaatagaaagaatgaacttaaaaaatttagaaaac
gctaacccaaatgcgaataaagcgcaagactttatacctataaacgatgtgaatggtgaa
aataggaataataactacttcaaccccgcgcgtaggaaaatgaacgataaccgtgcgtcg
acttttaacctgaacaagaatcacgatgcgcttataggtgaatacggagggtgtccgtgg
agagtgcccaactatgcttacaagcctgggatcttggggctccacgaagagatcgagcac
ttctacatgtacatgtctccaaccgagactgagcacctggtccggacgacggtggtgaac
cggatccggcaggccatcctcacactgtggccgcaagccagggtcgaggtgttcggctcc
ttccgcaccggcctgtatttgcccaccagcgacattgatctggttgtcataggacaatgg
gagaagctgccactgtggacactagagcgcgagctggtcggccaggacattgctgagaag
gagagcatcaaggttctggagaaggcaacggtgcccatcgtcaagatgaccgacaaatac
tcggatgttaaggtggatatatctttcaacatgagcagtggtgttaagagcgcggaactt
atcaaacagtataaggaaaagtatccgtgtctctctcgccttgtgatggtattgaaacag
ttcctactccaacgcgacctgaacgaggtgttcacgggagggatatcctcttactccctc
atcctgatgtgcatcagcttcctccaactgcaccccagaccggagaggctcaggcagcct
cagaatctaggggtgttgttagtggaattctttgaactgtacggaaggaagtttaactat
gtgaagacggcgatcagagtcaagaatggggggtcctatgtttctaaggatgatattcag
aaggaaatgaacgacgggcatagaccgtcactgctctgtatagaagaccctctcacgccc
ggcaacgatatcggacgatccagctacggcgctattcaagtcaaacaggcattcgactat
ggctacataatccttcagcaagcggtcgcgccccacaacgtgcagctgctggcgcgacac
agcgtgctcggccgcatagtgcgcgtgaccgaccacgtactacaataccggcgctgggtg
cgcgacacattcgagccgtatttcttcccacagcgggccccgagaaggctccgacctagt
cgagagccctctcctgagccctctgatagtgaccgggagtggtcggaccgctgcggctcc
cccgcgcgcacctccccgccgccgctgtccgcgctgcagtgctcctcccccacgccgcgg
cgcgtgtccgcgcaccaaagcctcattatacaccacatcacctccaactcagacttcaac
aatattccttcaggcgtaatgcaacaacgcttcggcggcggcgacaacaacacgaaatcc
cggaccccgcgttcgttctcgtccaagcaacggcggtacacgtcgccgcccgcgcagccg
cgcgcccgcgccgacccgccgccgcgacacaacaagaagcggcgccagtacacgcagcag
ccgcagcgatga
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