Pectinophora gossypiella (pink bollworm): 126377175
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Entry
126377175 CDS
T09293
Name
(RefSeq) general transcription factor IIH subunit 3
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
pgw
Pectinophora gossypiella (pink bollworm)
Pathway
pgw03022
Basal transcription factors
pgw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pgw00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126377175
09124 Replication and repair
03420 Nucleotide excision repair
126377175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgw03021
]
126377175
03400 DNA repair and recombination proteins [BR:
pgw03400
]
126377175
Transcription machinery [BR:
pgw03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
126377175
DNA repair and recombination proteins [BR:
pgw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
126377175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
126377175
NCBI-ProteinID:
XP_049880824
LinkDB
All DBs
Position
22:complement(6580833..6588684)
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AA seq
291 aa
AA seq
DB search
MADDDIPSDSSLLTIIVDTNPNQRYITEEPKVLTHVLDAVIAFANSHLMQKARNQLAVIG
CHFHKSEYLYPSPGKPLDVRQIDGQYELFTLVEKTIKMRLVNLIKSQPQEEKPGESLLAG
ALAMALCFIARVRREANPALRVSSRILIVTGSADTAAQYINYMNVFFTAQKQQVIIDVCS
LDRDLSLLQQGCDITGGLYLKVPQLEGLLQYLLWVFLGEGAERHKLVLPGRGRVDYRAAC
FCHRELLTIGYVCSVCLSVFCKFSPICTTCHTVFKIGGPLPLKPKKKKMKI
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgatgatatcccttcggacagcagtctactgactatcatagtggacacaaat
ccgaaccaacgctatataacggaagaaccgaaggtgctcacacatgtccttgatgcagtc
attgccttcgccaactcacatctcatgcagaaggcgaggaatcagcttgctgtcatcgga
tgtcattttcataagagtgaatacttatatccatcacctggtaagccgctagatgtacgg
caaatagatggacaatatgaattatttaccctagtagagaagactattaaaatgagatta
gtgaacttaataaaaagtcagccacaagaagagaaaccgggggagtcacttttagctggt
gctttggccatggcactttgttttattgcaagagtgcgtcgcgaagccaaccccgccctg
cgcgtgagcagcaggatcctgatagtgaccggcagcgccgacaccgccgcgcagtacatc
aactatatgaacgtgttcttcactgctcagaagcaacaagtgataatcgacgtgtgttcg
ttggacagggacttaagtcttcttcaacagggctgcgacatcaccggcgggctctacttg
aaggtgccgcaacttgaaggactcctgcagtacttgttgtgggtgttcctcggggagggg
gcggagcgccacaagctggtgctgcccggcaggggccgcgtggactaccgcgccgcctgc
ttctgtcatagagagctgctcactataggatatgtctgctctgtatgtcttagtgtgttc
tgcaagttcagccctatttgcacgacttgccacacggtgttcaaaatcggaggtcctctg
cctctaaagccgaagaaaaagaagatgaaaatatag
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