Pectinophora gossypiella (pink bollworm): 126377214
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Entry
126377214 CDS
T09293
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
pgw
Pectinophora gossypiella (pink bollworm)
Pathway
pgw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126377214
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgw03019
]
126377214
Messenger RNA biogenesis [BR:
pgw03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
126377214
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
126377214
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
126377214
NCBI-ProteinID:
XP_049880869
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All DBs
Position
22:8023344..8024635
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AA seq
217 aa
AA seq
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MNPEKVKEIGKICIPGMRLSLYNKEFIPGPGTYELQGYIYATLAGVLKMEVDETTKATTV
SVESPRTPSVLPKTGDIVTAKVMVVNSRQVHCTILCVGPSVLVRPYRGILKKEDIKSTDK
DRIDPYKCFRPGDVILARVLPMTEIHWYHLSTAENELGVVIATAEGSPQGVSMLPISWSE
MQCPKTLVKEPRKVARVIPENINQALFPIGNKDKEKK
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgaacccagaaaaagtgaaggaaataggaaaaatatgcattccaggaatgcgactaagc
ttatacaacaaagaattcatcccaggcccaggaacttatgaacttcaaggttacatttat
gccacattggctggtgtcctgaagatggaagtagatgaaaccaccaaggccacaacagta
tcagtagaaagtccacggactccaagtgtcctgcctaaaactggagatattgtcacagct
aaagtaatggtggtaaattcaagacaagtccattgcacaatactttgtgttggcccttca
gtccttgtaaggccttacagaggtatattgaaaaaagaagatataaaatccacagataaa
gacaggatagacccctataaatgtttcaggcctggtgatgtcatattggcaagagttctt
ccaatgacagaaattcattggtaccacctgtctacagcagaaaacgaacttggagtggtc
atagcaaccgcagaggggtccccacagggtgtaagcatgttgcccataagttggtcagag
atgcaatgtcctaaaacccttgtcaaagaacccaggaaagttgccagagtcatcccagaa
aatataaatcaagcactatttcctattggaaacaaggacaaagaaaagaaatga
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