Pectinophora gossypiella (pink bollworm): 126377395
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Entry
126377395 CDS
T09293
Name
(RefSeq) CDK-activating kinase assembly factor MAT1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
pgw
Pectinophora gossypiella (pink bollworm)
Pathway
pgw03022
Basal transcription factors
pgw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pgw00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126377395
09124 Replication and repair
03420 Nucleotide excision repair
126377395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgw03021
]
126377395
03400 DNA repair and recombination proteins [BR:
pgw03400
]
126377395
Transcription machinery [BR:
pgw03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
126377395
DNA repair and recombination proteins [BR:
pgw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
126377395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-RING_UBOX
zf-UDP
zf-C3HC4
zf-RING_2
zf-C3HC4_2
TRAF3_RING
zf-P11
zf-RING_4
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
126377395
NCBI-ProteinID:
XP_049881084
LinkDB
All DBs
Position
23:complement(5359896..5363998)
Genome browser
AA seq
309 aa
AA seq
DB search
MDDQACPRCKTTKYRNPSLKLMVNVCGHALCESCVDLLFLKGSGSCPECNVPLRRSNFRV
QLFEDAMVEKEIDIRKRVLKDYNKKEEDFATLREYNDYLEEIETIIYNLTNNIDIVGTNK
RIEQYKKENKELIQKNKVKIGREELELEEILEIEKQMEDLRRSEAARIEQEAKKQKIREK
EALIDELMFAEGDAKDILTTFAQNIANKQEEALPVVPKVTQFSTGVKFTRGSNHTMLPVI
EEGPLYKYEPPVVPDWIGPDPPTLDDIVNNGYLQHVRTETETEKAGGYSATLPCLRALQD
ALAGLYHAS
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggatgaccaagcatgcccccgctgtaaaaccacgaaatatagaaatccctctttaaag
ttgatggtaaacgtgtgcggtcatgccttgtgtgaaagttgtgtcgatttgctgttttta
aaaggatcgggatcatgcccagaatgtaatgtgcctcttcggaggagcaacttcagagtc
caattattcgaagatgctatggtagagaaggaaatagacatacggaagcgtgttcttaaa
gattacaataaaaaggaggaagactttgccacgttacgagaatacaatgactatttagaa
gaaattgaaactataatatataatctgacgaataatattgatatagttggcactaataag
aggattgaacagtataagaaggaaaataaagaattgatacagaagaataaggttaaaata
ggaagagaagaattagagttagaagagatactagagatagagaagcagatggaagaccta
agaagatcagaagcagcccgtatagagcaggaagctaagaagcaaaagattcgggagaag
gaagcgttgattgatgagttaatgtttgctgagggtgatgccaaagatatactgaccaca
tttgctcaaaacattgccaacaaacaagaagaagctttgcctgttgtgccgaaggtgaca
cagttctcaacgggcgtgaagttcacgcgaggcagcaaccatacaatgttaccggtcatt
gaagagggcccattgtacaagtatgagccaccggttgtaccggactggataggaccagac
ccacccactctggatgatattgttaacaatgggtatttgcagcatgtcagaacagagaca
gaaacagagaaagcgggtggttactcagccactctgccgtgcctgcgcgccctgcaagac
gcactcgctggcctctaccacgccagctga
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integrated database retrieval system
