Pectinophora gossypiella (pink bollworm): 126378335
Help
Entry
126378335 CDS
T09293
Name
(RefSeq) paired amphipathic helix protein Sin3b isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
pgw
Pectinophora gossypiella (pink bollworm)
Pathway
pgw04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pgw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
126378335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pgw03036
]
126378335
Chromosome and associated proteins [BR:
pgw03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
126378335
REST complex
126378335
Heterochromatin formation proteins
Other heterochromatin formation proteins
126378335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH
Sin3_corepress
Sin3a_C
HHD_RTEL1
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
126378335
NCBI-ProteinID:
XP_049882541
LinkDB
All DBs
Position
26:6562645..6630129
Genome browser
AA seq
1398 aa
AA seq
DB search
MMKRTAVPRLGPDEPPPLPPQTVSQIQQAGASNMHTLAQSAQPQILGATPMLSVGGGGAF
RGSRAGAPAVINYLKAGVQAVQYAPKQPAPHHPHPAPPAVPRLKVNIPPSPGLGQPPAVS
LHGRASPAPAAPPLAGPPGPPGAVGPPGAVGPPVGAVAGGAAQFQRLKVEDALSYLDQVK
YKFNTQPQVYNDFLDIMKEFKSQTIDTPGVITRVSNLFKGHPELIVGFNTFLPPGYKIEV
QSNGQVSVSMPSPTGLGGGGVLLGVHHAPPQPQLVHLLPVAPSVSSAIVHNLSVSAAPAN
TLHHISQAHQQIEAAAIHHQQPGAAPAPGGAGHAPAPPGQPVEFNHAIEYVNKIKSRFSR
QPDKYKRFLEILHAYQRGHRDVKEPQAKQQTEQEVYSQVAKLFENQEDLLAEFGQFLPDA
KAVTKPAAYPAHARDDTLLPPPQLREGELGTTSPPLPQHHPLPQHHAHTQQVAKHPAPAP
LPPATTPHHHLKRSPSFSSSTPLSGGAPPAKKARVGAWAGAGVRDVSYAEAAKLATAHDY
SFFDKARKALRSQHVYDNFLRCLLLFTNEIISSSELVCVTAPFLVRQPELHKWLTDFLQP
ASPPHTPTHAAHAAHATHAHAGAIHQGFSNSYNTDRSERSDRDTKRYEPIGAYGAQLRHE
RPQGDAAMDIDLTTCKRLGTSYCALPREAAARRCSGRTALCREVLNDTWVSFPTWSEDST
FVTSRKTQYEEYIYRCEDERFELDVVIETNAATIRVLEGVQKKLSRMSPEEAAKYRLDEC
LGGHSPTIHQRALRRIYGDKVAVDIIAGLKKNPVVAVPVVLRRLKAKEEEWREAQKGFNK
QWREQNEKYYLKSLDHQGINFKQNDLKAMRSKSLFNEVEAAYAARRPGPHLVVDYNMQSR
QEAIKIVRDCAELLIHHARRQTAIQKAEKRRIKQLLRQFLPDLFAHPRQPLSDDENDEEK
EEPTSPGSPAADEKEKDGDKNSGDKVKQEKESSESDNASDKSGKNNKYDKENKPKNNNTD
AKNDKDSTMPANNVKRSNSNDEVKNEFKDEIDDDYRDHPPNEARFVCTSSWYLFLRLHGV
VCQRLAAARRTAAALHEQEARDTGGRHPSVATALRLKPNNLPVDASSPATYYTALLELVK
GVLDGNTEPAAFEDAAREMLGIRAYPAYTLDKLVSIAVRQLQHCVSEPWSARATELAARG
GMRGPPAYVRRAARYLRHDHAAFLVKVYGGDECKVTFELLEGAGEGRTSPHNNDTSRLSP
THQRGGRGGEAVARLAAWSLYTERFARPPATPAGPAAGPAAPRANKPVFLRRCARRTGGD
HRNVAPGPPAGSTGRARRKPLLHDHSECTLSSTLRLLAARPQRLYRPGALRAARASHARL
HAARRAAFRAWMAARPGA
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagcgcacagcggtcccacgtttgggccccgatgagcccccaccactgcccccc
caaactgtctcccagattcagcaagcaggagcaagcaacatgcatactttggcccaatcg
gcccaaccacaaatattaggagcgacgccgatgctgtcggtgggtggcgggggggcgttc
cgcggctcgcgcgcaggcgcgccggccgtcatcaactacctgaaggcgggcgtgcaggcc
gtgcagtacgcgcccaagcagcccgcgccgcaccacccgcaccccgcgccgcccgccgtg
ccgcggctcaaagttaacataccgccatctccgggtctcgggcagcccccagccgtgtcc
ctgcacgggcgggcgtcccctgcgccggccgcgcccccgctggcgggtcctcccggcccc
ccgggcgctgtggggcccccaggagccgtgggcccacccgttggcgccgtcgccggcggc
gctgcgcagttccaacgcctcaaggtcgaggacgcgctgtcctacctcgaccaggtcaaa
tacaagttcaacacgcagccccaagtctacaatgacttcctcgatatcatgaaggagttc
aagagtcaaaccatcgacacgcccggagtcatcacacgggtctccaacctgttcaagggc
caccccgaactcattgttgggttcaacaccttcctaccacctgggtacaagattgaagtt
cagagtaatgggcaggtgtcggtgtccatgccgtctccgacggggctgggcggcggcggg
gtgctgctgggcgtgcaccacgcgccgccgcagccacagctggtgcatctactgccggtg
gcgccgtctgtcagcagcgccatcgtccacaacctgtctgtgagcgcggcccccgccaac
acgctgcaccatatatcgcaagctcatcagcagattgaggctgcggcgatacaccatcag
caacctggcgcagcgccagcccccggcggcgccggccacgcgcccgctccaccaggacaa
ccggtggagttcaaccatgccatcgagtatgttaacaagatcaagtcgcggttctcgcgg
caaccggacaagtacaagcggttcctggagatactgcacgcgtatcagcgcgggcacaga
gacgtcaaggagccgcaggcgaagcagcagacggaacaagaggtttactcgcaggtggcg
aagctgttcgagaaccaggaggacctgctggcggagttcggccagttcctgccggacgcc
aaggccgtgaccaagcccgccgcgtaccccgcgcatgcgcgcgacgacacgctgctgccg
ccgccgcagctgcgtgagggtgagctgggcacgacgtcgccgccgctgccgcagcaccat
cccttgccgcaacatcatgcgcacacgcagcaggtggcgaagcacccggcccccgccccg
ctgccgccggcgaccaccccacaccaccatctcaagagatcacccagcttctcctctagt
acgccattgtcgggcggagcgccgccggccaagaaggcgcgcgtgggcgcgtgggcgggc
gcgggcgtgcgcgacgtgtcgtacgcggaggcggccaagctggccacggcgcacgactac
agcttcttcgacaaggcgcgcaaggcgctgcgctcgcagcacgtctacgacaacttcctc
agatgcctgctgctgttcacgaacgagataatctcgtcgtcggagctggtgtgcgtgacg
gcgccgttcctggtgcggcagcccgagctgcacaagtggctcactgacttcctgcagccc
gccagcccgccgcacacgcccacgcacgccgcgcacgccgcacacgccacgcatgcgcac
gccggcgccatacaccagggcttcagcaactcgtacaatacggaccgcagcgagcgaagc
gaccgcgacaccaagcggtacgagcccatcggagcgtacggagcacagctcagacacgag
cggcctcaaggagacgccgctatggatatagacctgaccacctgcaagcggctcggtacg
tcgtactgcgcgttaccccgcgaggcagccgcgcggcgctgctcaggccgcacggcgctg
tgccgtgaagtgctcaacgacacgtgggtttccttccccacctggagtgaggactccacg
tttgtcaccagccggaagacgcaatatgaagagtatatatacaggtgtgaagatgagagg
tttgagctggacgtggtgatagagacgaacgcggccacgatccgggtgctggagggcgtg
cagaagaagctctcccggatgtcccccgaggaggcggccaagtaccggctcgacgagtgc
ctcggcggacactcgcccaccatccaccagcgggcgctgcgccggatatacggtgacaag
gtggcggtggatattatcgctggcctcaagaaaaaccccgtggttgctgttcccgtcgtg
ctgaggaggctgaaggctaaggaggaggaatggagagaggcgcaaaagggcttcaacaaa
cagtggcgggaacagaacgagaagtattacctgaagtccctcgaccaccaaggcatcaac
ttcaagcagaacgacctgaaggcgatgcggtccaagtcgctgttcaacgaggtggaggcg
gcgtacgcggcgcggcggcccgggccgcacctcgtggtcgactacaacatgcagtcgcgg
caggaagcgatcaagattgtccgcgactgcgcggagctgctgatccaccacgcgcggcgg
cagacggccatacagaaggcggagaagcgccgcatcaagcagctgctgcggcagttcctg
cccgacctgttcgcgcacccgcggcaaccactctccgacgacgagaacgacgaggagaaa
gaagagccgacgagtcctggtagccctgctgctgacgagaaggaaaaggatggagacaaa
aacagcggcgacaaggtcaaacaggagaaagagtcatccgaatctgacaatgcgtcggac
aagagcggcaaaaacaacaagtatgacaaagagaacaaacctaagaacaacaacacagac
gccaaaaatgacaaggatagcacaatgcccgcaaacaacgtgaagcgaagcaacagtaat
gatgaggtgaagaatgagttcaaagacgagattgatgatgactatagagaccatccacct
aatgaggccaggttcgtgtgcacgtcgtcgtggtacctgttcctgcggctgcacggcgtg
gtgtgccagcggctggcggcggcgcggcgcacggcggccgcgctgcacgagcaggaggcg
cgcgacaccggcggacgccaccccagcgtcgccaccgcgctgcggctcaagcccaacaac
ttaccagtggacgcgtcgtcccccgcgacgtactacacagcactgctcgagctggtgaag
ggagtcctggacgggaacacggagccagcagcgttcgaggacgccgcgagagagatgctc
ggcatccgagcctaccccgcctacacgctcgacaagctcgtctccatcgctgttagacag
ctgcagcactgcgtgtcggagccgtggtcggcgcgcgccacggagctggcggcgcgcggc
ggcatgcgcggcccgcccgcctacgtgcggcgcgccgcgcgctacctgcggcacgaccac
gccgccttcctcgtcaaagtgtacggcggcgacgagtgcaaagtgacgtttgagttgttg
gagggggcgggggagggccgcacctccccgcacaacaacgacaccagcagactgtcgccc
acgcaccagcgcggcggccgcggcggcgaggcggtggcgcggctggcggcgtggtcgctg
tacacggagcggttcgcgcggccccccgccacgccggcggggcccgccgccggcccggcc
gcgccgcgcgccaacaagcccgtgttcctgcgccgctgcgcgcgccgcaccggcggggac
caccgcaacgtggcgcccggcccgcccgccggctccaccggtcgcgcgcgccgcaagccg
ctgctgcacgaccacagcgagtgcacgctgagctcgacgctgcggctgctggcggcgcgg
ccgcagcgcctgtaccggcccggcgcgctgcgcgccgcgcgcgcctcgcacgcgcgcctg
cacgccgcgcgccgcgccgccttccgcgcctggatggccgcccggcccggcgcctag
DBGET
integrated database retrieval system
