Pectinophora gossypiella (pink bollworm): 126378777
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Entry
126378777 CDS
T09293
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
pgw
Pectinophora gossypiella (pink bollworm)
Pathway
pgw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126378777
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgw03041
]
126378777
Spliceosome [BR:
pgw03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
126378777
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_TEP1_2nd
PRP4
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EIPR1
DSE1_N
Beta-prop_EML
ASA1
Beta-prop_DCAF4
WDR90_beta-prop_4th
ANAPC4_WD40
CFAP251_N
NBCH_WD40
Beta-prop_WDR41
Beta-prop_SPT8
Beta-prop_NOL10_N
Beta-prop_SCAP
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
126378777
NCBI-ProteinID:
XP_049883126
LinkDB
All DBs
Position
27:complement(903703..918917)
Genome browser
AA seq
534 aa
AA seq
DB search
MSDDESLIPAKKSKQLHYGSLEEQEKARLAAIAAAAREGVEDNGGKELGDIQISSEYMEL
EEEMSRDKKALLEEFERRRKARQLNVSTDDDEVRRSLRQLGEPVCLFGEGPAERRVRLRD
LLSYLGEDAINKALEEEEARIERDKRHEGTWYHEGPASLRDARIWIARYSLPRAKQRLAL
SRAERQQPGSARAAARQEAQRRAAALTTYCSQIGDTRPISFCRFSSDSKMLITASWSGLS
KVWSVPDCVPLQVLKGHTCNVSCAVFHPSAVMPHHFQDKINTSKEEDPQAMDAQISDERS
EVCSMATCAYDGSVHLWNFNSESPLASLPGHSPSRVARLAFHPSGRYLATTVFDHSWRLW
DLHTATEVLHQEGHAKPVYSVAFQCDGSLAVTGGMDAFGRVWDLRTGRCVMLLEGHLGPV
LGVDCSPQGDQLATAAADHQAKIWDLRSRRTLYTIPAHTHMLSDVRYQRSHGHYLLTSSY
DRSAKLWSNPGWHPLRTLSGHDNKVMSADISFDNKYVATASYDRTFKLWAPDLA
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgatgagagtttgattcctgcaaagaaatccaaacagttacattatggatcc
cttgaggagcaggagaaggcccggctggccgccatcgcggctgcagcgagggaaggcgtc
gaagataatggcggaaaggagctgggagacattcaaatttctagtgaatacatggagttg
gaggaggagatgtcccgggacaagaaggcgctgctagaggagttcgagcgcaggcggaag
gcccgccaactgaatgtatctactgatgatgatgaggtccggagaagtctaagacagctg
ggcgagccggtatgcctgtttggagaggggcccgcagagaggagagtcagactgagggac
ctactcagctatttaggagaagatgcgataaacaaggcgttggaggaggaggaagctagg
atagagagggacaaacgccacgagggcacctggtaccacgaggggccagcctcgctgcgg
gacgccaggatatggatcgcacggtactccctgccgcgggccaaacagaggctggccctg
tcccgcgccgagcgccagcagccgggctccgcccgcgccgccgcgcgccaggaggcgcag
cgccgggccgccgccctcaccacctactgcagccagatcggcgacactcggccgataagt
ttctgtagattcagcagcgacagtaaaatgctgatcacggctagctggtctggtctgagc
aaggtgtggtctgtcccggactgtgtcccgctgcaggtgctgaaggggcacacttgcaac
gtctcctgcgccgtgttccaccccagcgctgtgatgccgcaccacttccaggacaagata
aatacatcgaaagaagaggaccctcaagcgatggatgctcaaattagcgacgagaggtcg
gaagtatgctctatggcgacctgcgcctatgacggctcagtgcatctgtggaacttcaat
agcgagtccccgctggcatctcttcccgggcactcaccgtcgcgcgtggctcgcctggcc
ttccacccatcagggcgatacctcgccaccacggtcttcgatcactcctggagactatgg
gacttgcatacagccacggaggttttacatcaagaaggacacgctaagccagtttacagc
gttgcatttcaatgtgacgggtcgttggcggttaccggcggtatggacgcgttcggccgc
gtgtgggacctccgcacggggcgctgcgtgatgctgctggagggccacctggggcccgtg
ctgggcgtggactgctcgccgcagggggaccagctggccaccgccgccgccgaccaccag
gccaaaatctgggatctaagaagcaggaggacattatatactattcccgctcacacgcac
atgttgagtgatgtccgttaccagcgaagtcatggccattacctgctcacctcctcatac
gaccggagcgcgaagctgtggtctaaccccggctggcacccactccggaccctctccgga
cacgacaacaaggtgatgtcggccgatatatcgtttgacaacaagtacgtcgcgactgcc
tcctacgaccgcacattcaaactatgggcaccggatttagcttaa
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