Pectinophora gossypiella (pink bollworm): 126379150
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Entry
126379150 CDS
T09293
Name
(RefSeq) protein suppressor of forked
KO
K14408
cleavage stimulation factor subunit 3
Organism
pgw
Pectinophora gossypiella (pink bollworm)
Pathway
pgw03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pgw00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126379150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgw03019
]
126379150
Messenger RNA biogenesis [BR:
pgw03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
126379150
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
NRDE-2
RB_A
Motif
Other DBs
NCBI-GeneID:
126379150
NCBI-ProteinID:
XP_049883752
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Position
28:complement(5243535..5270744)
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AA seq
729 aa
AA seq
DB search
MTTIATEESAEIDWGNERLIRAQRAVEANIYDVDSWSLLIREAQTRPINEVRTMYEKLIA
AFPTTGRYWKIYIEQEMKARNFEKVEKLFQRCLMKILNIELWRLYLNYVKETKCMLPTYK
EKMAQAYDFALDKIGLDIHAYPIWNDYVTFLKSVDAVGSYAENQKISAVRKVYQRAVITP
IIGIETLWKDYIAFEQSINTIIAERMAMERSREYMNARRVAKELETVTRGLNRNMPATPP
TADREEMKQVELWKKYIGWERSNPLRSEDTALVGRRVMFAIEQCLLCLAHHPDVWHQAAQ
FLDHSAKLLQEKGDSNAARLFSDEAAAVYERATSGPLKQSTLLHFAHADYEESRLHYNKV
HQVYTRYLDMEDIEPTLAYVQYMKFARRAEGIKSARTVFKRAREDPRSRYHVFVAAALME
YYCSKDKNIAFRIFELGLKKFSHIPEYVLCYIDYLSHLNEDNNTRVLFERVLSSGSLTPE
ASVDIWNRFLEFESNIGDLLSIVKVEKRRQAVLEKIKEFEGKETAQLVDRYKFLDLYPCS
IAELKSIGYTEVASMSNKSWALGGPLAGVSSELVAVILGHKDNDPNKDIARPDTSQMIPY
KPKSNPLPGEHPIPGGTFPLPPAAAALCTRMPPPSSYRGPFVHVDRLMQLFNRISLPDKP
PPPTQENGCDTKLFDLARSVHWIMGDEGITTVSNKARRRKAGEDSDDDELGVAPPVNDIY
RQRQQKRVK
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccatagcaacagaggaaagcgctgagattgactggggaaatgagaggttaatt
agggcgcagcgagcggtggaagccaacatatacgatgtggattcctggtctctactcatt
agagaggcccagacgaggccgatcaatgaagtgcggacgatgtacgagaagctgatagct
gcgtttcctactaccgggcgctattggaagatttacatcgaacaggagatgaaggcgaga
aatttcgaaaaagtggaaaagcttttccaacggtgtctgatgaagattctgaacattgag
ctgtggaggttgtacctgaactacgtaaaggaaaccaaatgcatgctgccaacatacaaa
gagaagatggcccaagcctacgacttcgccctggacaagatagggctggacatccacgcg
tatcccatctggaacgactacgttacgttcctcaagagtgtggacgctgttggctcctac
gctgagaaccagaagatctctgctgttaggaaggtgtaccaacgtgcggtgataactcca
ataattggtattgagacgctgtggaaagactacattgccttcgagcagagtattaacacg
attatagccgagcgcatggccatggagagatcgcgcgagtatatgaacgctcggcgagtg
gccaaggaattggagacggttacgaggggactgaatagaaacatgcctgctacgccgccc
actgccgaccgagaggagatgaaacaggtggaattatggaagaagtacataggctgggag
cgttccaacccgttgcgttcagaagacacggctctagtaggtcggcgggtgatgttcgct
atagaacagtgtttactgtgtctagcacaccatccggatgtttggcaccaggccgcgcag
ttcttggatcactctgctaagctactgcaagagaaaggggactcgaacgcggcccgcctg
ttctccgacgaggcggcagcggtctacgaacgagccaccagcggcccactcaagcaatcc
accctgctacacttcgcgcacgcggactatgaagagagcaggctacactataacaaggtg
caccaggtctacacccgctacctggacatggaggacatagagccgaccctggcgtacgtg
cagtacatgaagtttgcgaggagggccgagggcatcaagtctgccaggacagtgttcaag
agggcccgggaggaccccagatcccgctaccacgtgttcgtggccgcagccctaatggag
tactactgctcgaaggacaagaacatcgcgttccgaatcttcgaactcggacttaagaag
ttttcacacatccccgagtatgtgttgtgctatatcgattacctgtcgcatttgaacgag
gacaacaacacgcgcgtactcttcgaaagagtactgtcctccggcagcctgaccccggag
gcgtcagtggacatctggaaccgcttcctggagttcgagtccaacatcggcgacctgctc
agcatcgtcaaggtggagaagcgacgccaggctgtgctcgagaagatcaaggagttcgag
ggtaaggagacggcgcagctggtggaccggtataagttcctggacctgtacccttgcagc
atcgccgaactcaagtccatcgggtacactgaggtggcgagtatgtcaaataagtcgtgg
gcgctgggtgggccgctggcgggtgtctcgtcagaactggtcgccgtcatactcggacac
aaagacaacgatccgaataaggacatcgcccgaccggataccagccaaatgatcccgtat
aaaccgaaatcgaacccactacccggggaacatcctataccaggtgggacgttcccccta
cccccggcggcggcggcgctgtgcacccgcatgccgcccccctcgagctaccgtgggccc
ttcgtccacgtcgaccggctcatgcagctgttcaacaggatatcactgcctgacaaaccg
ccgccgccgacacaagagaacggctgtgacaccaagctgttcgacctcgctcgctccgtg
cattggatcatgggcgacgaggggatcactaccgtctctaacaaggcacgaagaaggaaa
gctggcgaggactctgatgatgatgagctcggcgtggcgccgccagtcaacgacatctat
cggcagcggcagcagaagagagtcaaataa
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