Pectinophora gossypiella (pink bollworm): 126379350
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Entry
126379350 CDS
T09293
Name
(RefSeq) endoribonuclease Dicer
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
pgw
Pectinophora gossypiella (pink bollworm)
Brite
KEGG Orthology (KO) [BR:
pgw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pgw03036
]
126379350
Chromosome and associated proteins [BR:
pgw03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
126379350
microRNA pathway
RISC loading complex
126379350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Dicer_dsRBD
Ribonucleas_3_3
Dicer_platform
Dicer_dimer
PAZ
Helicase_C
Dicer_PBD
DEAD
Motif
Other DBs
NCBI-GeneID:
126379350
NCBI-ProteinID:
XP_049884013
LinkDB
All DBs
Position
29:5448177..5509692
Genome browser
AA seq
2480 aa
AA seq
DB search
MEAPCSRFTAAEGGARLAAAATAGNTLAVEYGSFISTRMIYEDAYKIRGSLSEGRQRSVY
CARASRVPVVAHELQILTDLAVTTAVEYDPHKDWTAELDSKEVLVCTSSVLRHILEAGLL
GISNINVLVLDSCHHIATDEGLQYIMQQYKACEDTKRPRILALTYPLFSSPKKENATSAK
TDEDQTKEEKVDEEQHDEETDGDEKTDVIENVPKIVEITDDVSKSKDNDEELKEINREVK
EDEKKRRQKKEEVEAIGVYENLDDFDMYEKLEWKIEQLEKDLCCQMDLAEDIDGGKRLSA
TITKPKEVIIEYSPQRSPDDQLADYSQLESYMRDTIGDAEAFLDEHRYDPTEIYGEDLYE
EFKNIPDPTMEPKYIFRQFVYVLDELGPYAADKAAFSLLTKLEKLKIKVPYERHFLLLCL
CTSVFVKIRCYTDIVFSKYSSDWEKIKTFSTPKVLRFAEILEKFSPPEQPKEFAKIPDLN
KDNRTLEYRMKTDEMMQTIEKCDFMSLSDKIQDKVNSFEANLKELDESKSKSDELAPKEL
DSPVEVTTPQNELPTPANELNSPQDNKVLGFSRRSGHRARGRGRVQRSNAARVQQMQQNP
DALCGIVFMKEALMAKIMFMVIVDMSRSSPKLSYICAQYCAVEKPADSGTEPRECQRQAK
KQEDVLKKFRMHECNLLLATSALEEGIDLPRCNLVVRWDIPASYRSYGLCRSRGRAPRAA
CALLARGRSAQARAALHHVAVYRELDQIISRKCGCGMQNEPPQSEEDHADSLTHLIKPYT
PNDNRPRKDSNILTQNNKQKIQDKTQSPNNIKLENDEEQKVTSENNSEIINCVDNSDSLK
QASENNKNGENLLCNKCNIKRNSVDTVCQCVISERNEIVVNSFGNNKKSDKKTDDGIASV
DLSNAIALINRYCGKLPSDTFTRLAPQWWMEEVQLPAKGSADPRRAFICTLRLPLNCPVK
YNIVGHPMPTQVLARRMVALQACRILHKSGELDNQLMPIGKENFKAAELDSTCNMGDSGD
PSDCARPGTTKRRQYYYKRTAWAFTDCQPVVDATDAEIDPSNVKEAPTQDATAAVKNTGT
KRNMLYAIVSKLWCALPERYNTRGRRLHAPQNASQALGILMAREEPDNLQIPAFPVYTRS
GEVRVSVEYVPDADVRVSPRRGRLVRRFMRFVFAEVLRVRRRGMKLQSEGSTHNNYYIVP
TIKSTREDGTSKMDIDWSFLELIYQHTEEKKHSEIERPNLWHHDEEEEESVKKVEKKNGE
VKKMSNPLLKEGETFVFDPEKYREAVVTPWYRNQDQPQFFLVAEICWNLTPDSEFPSASH
TTFRQYYSSKYGVTLTQSNQPLLDVDHTSNRLNLLTPRYVNRKGVALPVSSERTRRAKRD
RLDQKQILVPELCRVHPFAAPLWFATVALPCVLYRINALLIADEIRRAVAIEVGLGIPKI
DEETCPGFQWPPLDFGWSLAEVLNADSEKSEKKKDEEDTKEKAMKEIEDKDSKNDEEGTT
EEGTREKTINDILHEKEAAESGFEIGTWSNDMASSIPSNEYDEFMEPLPPNLTFVTSASG
GTNWCDPVEKPKCQFQPSSKYSMADSDCSYMSSDFDTDDSDLNSEVSDDDTDTSGFFSSK
NSNAAMGVRIEYKTAHEAEAVDVERKKKVNPAPLPDEEDDARDRRSHERLVKEGEAPTEY
IRRFRDSVEQHKKEILQNGHLIYEDQPLPDILPEPTKESHEKLARTELASLKKLELDIRD
KLKIEELSATDLDLNTSEELTTQNELLKALDIQNELETQVHENDLELKTLKELTNSHEKL
ELTSHKIPNELDITNQQSEADLKNSNLELIEEIFPYGNTGLNLIENGQISLENIEKNKRI
LLAELKNSLPKDDIKKLNCFSMVDVNIDAPDYVNEKIVNIGFDSNEYLAKVDKNRDQEDC
KPYYLDGKAGKEFDFDYQPNLEGHPGPSPSVILQALTMSNANDGINLERLETIGDSFLKF
AITAYLYCAHPTVHEGKLSHMRSKQVSNLNLYRLGRNKRLGARMIASKFEPHDNWLPPCH
RPPSTLHPRLNESYDQVTNSEVPMDSSGCFIPYNLITQHSIPDKSIADCVEALIGAYLLE
CGPRGALLFMAWLGLRVLPPRPRPLQRRHEDPPRRPQPPPSTPRKYELTDSETESSDDEE
EISHEEQELPPEADWSWPGRPIGSLRPHRDENGEWVQTIFGELKAPPSPLLRYIEDPEGE
LEQMLSGYDALERTLQYRFKDRSLLLQALTHASHQQNRLTDCYQRLEFLGDAILDYLITR
HLYEDPRRHSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLTRYVKIQEE
NGHSISEEHYLIQEDEMEQAEDVEVPKALGDLFESVAGAIFLDSGMSLGAVWKSYVNLMG
AELEAFSAAAPKSPVRELLEAEPDTAKFGKPERLVDGRRVRVCVEVFGRGAFKGVGRNYR
IAKGTAARCALRHLKIHRQR
NT seq
7443 nt
NT seq
+upstream
nt +downstream
nt
atggaagccccgtgctcccggttcacggcggcggagggaggcgcgcggctggccgccgca
gccactgctggcaacaccctggctgtggagtacggctccttcatatccaccaggatgata
tacgaagacgcctacaagatccgaggctcattgtccgagggtcgtcagcgctccgtgtac
tgcgcaagagcgtccagggtgcccgtagtggcgcatgagctgcagatcctgaccgactta
gctgtcaccacagcggtggagtacgacccgcacaaggattggaccgccgagcttgacagc
aaagaggtgctagtgtgcacatcatcagtgctgcggcacatcctggaagctggtctcctg
ggcatctccaacatcaatgttcttgtactggacagctgtcaccatatcgccacggatgag
gggttgcagtatatcatgcaacagtataaggcatgcgaagacaccaaaagacctagaatc
ctggctttaacctacccactattttcttcaccaaagaaagaaaacgccactagtgccaaa
accgatgaagatcaaacgaaagaagaaaaggtcgatgaagaacaacacgacgaagaaaca
gatggtgatgaaaaaacggacgtaattgaaaatgtaccaaaaattgttgaaatcaccgat
gatgtaagtaagtctaaagataatgatgaagaattgaaagaaataaatagagaagtaaaa
gaagatgagaagaagagacgacagaagaaggaagaggtggaggcaataggggtgtatgag
aatttggatgactttgatatgtacgagaaattggagtggaagattgagcagttggagaag
gacctgtgctgccagatggatttggctgaggacatcgatggtggaaagaggttatcagca
acaataactaagccaaaggaggtcataatagaatacagtcctcaaaggtcgcctgacgac
cagttggcagattactcccaactggagtcgtacatgagggataccatcggcgatgctgag
gcgttcttggatgaacacagatacgatccaacagagatctacggtgaagatctatatgag
gagttcaagaacattccagacccgacgatggaacctaaatatatatttagacaatttgtt
tacgttcttgatgagttagggccctacgcagccgacaaagcagcgttctcactcttgacc
aaactggagaaattaaaaataaaagttccatatgagagacatttcctcttactctgcctt
tgtacttccgtctttgtcaagatacgatgttacaccgacattgtcttctcgaaatactcc
tcggattgggagaaaatcaagacattctccaccccaaaagtgctcagattcgctgaaatc
ctggagaaattctccccgcccgaacagccaaaagaattcgccaaaataccagacttgaac
aaagataatcggactttagaatacaggatgaaaacagacgaaatgatgcaaactatcgaa
aaatgcgattttatgtcattaagcgacaaaatacaggataaagtaaactctttcgaagcg
aatttgaaagaactcgacgaatccaagtcgaaatctgacgaactcgctccaaaagaactc
gacagcccagtcgaagtcacgactcctcagaacgaactcccgactcccgcgaacgaactc
aatagtcctcaggataacaaggtattagggttctcgaggaggtctggacacagggcgaga
ggtcgtggaagagtccaaaggtcaaatgctgccagggtccaacagatgcagcaaaatcct
gatgctctatgtgggatcgtctttatgaaggaggcacttatggcgaagatcatgtttatg
gtgattgtggacatgtcccgttcgtctccgaagctgtcgtatatctgcgcgcagtactgc
gcagtagagaagcctgccgactcgggaaccgagccgcgagagtgccagcgacaggcgaag
aagcaggaggatgtgctcaagaagttccggatgcacgaatgcaaccttctgttggcgaca
tcagctctggaggaagggatcgacctgccgcggtgtaaccttgtcgtcagatgggacata
cccgcttcctaccgctcgtacgggctgtgccgcagccgcgggcgcgcgccccgcgccgcg
tgcgcgctgctggcgcgggggcggagcgcccaggcgcgcgccgcgctgcaccacgtggcc
gtctacagggagctggaccagattataagcagaaagtgcgggtgcggtatgcagaacgag
cccccacaatccgaggaggatcacgctgactccctcacacacctcatcaaaccttacact
cccaacgacaaccgacccagaaaagacagcaacatcctaacacaaaataacaaacagaaa
attcaagataaaactcaaagtccaaataatatcaaacttgaaaatgacgaggaacaaaaa
gtaacaagcgaaaataatagtgaaattattaattgtgtcgacaacagtgacagtttaaaa
caagcaagtgagaataataaaaatggtgaaaatctactttgtaataagtgtaatataaag
agaaatagtgtagatacagtgtgtcagtgcgttattagtgagagaaatgaaattgttgtt
aatagttttggcaataataagaaaagtgataagaagacggatgatggtattgctagtgtc
gacttgagcaatgctatagcacttattaaccggtactgtgggaagctcccatcggacacg
ttcacccgtctagctccacagtggtggatggaggaagtccagcttccagccaagggttca
gctgaccccaggagggccttcatctgcactctccgtctacccctgaactgtccagtcaag
tataacattgtgggtcaccccatgcctacacaggtcctagccagaagaatggtggctctg
caggcgtgcaggatacttcacaagagtggggagctcgataaccagctgatgcctataggc
aaggagaacttcaaagcagcagaactggactcgacatgcaatatgggagacagtggcgac
cccagcgactgtgcaaggccgggaacaacgaaacgcaggcaatattactacaaaagaact
gcgtgggcgttcacagactgtcaaccagtggtggatgcaactgatgcagagatagatcca
tccaacgtgaaggaagctcctacgcaagatgctactgccgctgtcaagaatactggtaca
aagcgtaacatgctgtacgcgattgtatcgaagctctggtgcgcgttgccagagcgttac
aacactagagggcggaggctccacgcgccccagaacgctagccaggcgctgggcatcctg
atggcgagagaggaaccagacaaccttcaaatcccagcgtttccagtatacacgaggtca
ggagaagtcagggtatccgtggagtatgtacctgacgccgatgtgagggtgtcaccccgt
cgagggcggctggtcaggagattcatgaggtttgtcttcgccgaggttctgagggtccgt
cgtcgaggaatgaagctccagagtgaggggtcaacccacaacaattactacatcgttcct
actatcaaatcgacacgagaagacggcacatcgaaaatggacatcgactggtcattccta
gagctaatataccagcacacagaagaaaagaagcattcggaaatagaaagaccgaacctc
tggcatcacgatgaagaagaagaagaatccgtgaagaaagttgagaagaagaatggggaa
gtgaagaaaatgtctaatcctctgttgaaggagggcgagacgttcgtgttcgaccctgag
aagtatagggaggctgtcgttactccgtggtataggaaccaggatcaaccccagttcttc
ctagtggccgagatctgctggaacctgactcccgactcggagttcccttcagcgagccac
acgaccttccgccagtattacagcagcaagtacggcgtcaccctcacccagagcaaccag
ccactcctggacgtcgaccataccagcaaccggctcaacttgctgacccctagatacgta
aaccgcaaaggcgtggccctgcccgtgtcttcagaacgcacccgccgagccaagagggac
cggttagaccagaagcagatattagtaccagagttatgccgagtgcatcccttcgcagcc
ccgctgtggttcgccaccgtcgcactgccctgtgtcttgtataggataaacgcgctgctc
atagcggatgagatccgtcgcgcagtggccatagaggtgggtcttggtatacccaagatt
gacgaggaaacctgtcccgggttccaatggccgcccctggacttcggctggagcctggct
gaggtactcaacgcggattcggagaaaagcgaaaaaaagaaggacgaagaggatacaaaa
gaaaaagctatgaaagaaatagaagacaaagactcgaagaacgacgaagaagggacgaca
gaagaaggaacgagagagaagacgatcaatgacattctacacgagaaggaagctgctgaa
agtggcttcgagattggcacttggagtaacgacatggcgtcctccatcccgagcaacgag
tacgacgagttcatggagccactgccgcccaacctcaccttcgtcacttccgcttccggt
ggaactaactggtgtgatccggttgagaagcccaagtgtcagttccagccgtccagcaag
tattccatggctgacagcgactgctcttacatgtccagtgatttcgacactgatgattcg
gacctcaactccgaagtcagcgatgatgacacggacaccagcgggtttttcagcagtaag
aattctaacgcggccatgggagtccgtatagaatataaaacggcgcacgaggcggaggcg
gtggacgtggagcgcaagaagaaggtgaaccccgcgccgctgccggacgaggaggatgac
gcgcgggaccgccggagccacgagcgcctggtcaaggagggagaggctcccacagagtac
atacgaaggtttcgagattcggtggaacaacataaaaaagaaatcttacaaaacggacat
ctcatatacgaagatcaacccttgcccgatatattgccagaaccaaccaaagaatctcac
gagaaactcgctcgaacagaactcgcaagtctcaaaaaactcgaactcgatattagagac
aaattaaaaattgaagaacttagtgcaacagatttagatttaaacactagtgaagaactt
actacacagaacgaactcttaaaagcactcgacatacaaaacgaacttgaaacacaagtt
catgaaaatgatctcgaactcaaaaccctgaaggaactcacgaactctcacgaaaagctc
gaattaacttcacacaaaattcctaacgaacttgacattactaaccaacaatctgaagcg
gaccttaaaaacagcaacctagaattaatcgaggaaatattcccttatggcaatacgggt
ttgaatctaattgaaaacgggcaaatatcgttggaaaacattgagaaaaacaagcgaatt
ttgcttgctgagctgaagaactctttgcctaaggacgatattaaaaagttgaattgtttt
tcgatggtggatgttaatattgatgctcctgattacgtgaacgagaagattgtgaacata
gggtttgacagcaacgaatatctggcgaaggttgataagaatagggaccaggaggactgt
aagccgtattacctggacggcaaggctggaaaggagttcgattttgactaccagccgaac
ttggaaggacatcccgggccgagtcccagcgttattttgcaggctttgacaatgtcgaac
gcgaatgatggtataaacttggagcggctggagacaatcggtgacagcttcctcaagttt
gctataactgcttatttgtactgtgcccatcccactgtgcatgaaggcaagcttagtcac
atgaggagcaaacaggtatcgaatttgaacctgtaccggcttggtcgcaacaagcgtttg
ggtgctcgtatgatcgcctccaagttcgaaccccacgacaactggctaccaccctgccat
cgcccgccctccacgctgcatccacgactcaatgagagctacgaccaagtcacgaactcc
gaagtgccaatggacagcagcggatgcttcattccatacaaccttataactcaacatagt
atacctgacaagtcgatagcggactgcgtggaggcgctgatcggcgcgtacctgctggag
tgcgggccgcggggcgcgctgctgttcatggcgtggctggggctgcgggtgctgccgccg
cgcccgcgcccgctgcagcgccgccacgaggacccgcccaggagacctcaacccccgccc
tctacaccgcgcaagtacgagctcacggactcggagacggagtcctctgatgatgaagaa
gaaatatcccatgaagaacaggaactaccccccgaggctgactggagctggccagggaga
cccatagggtctctgcgacctcacagagacgagaacggggagtgggttcagacaatattc
ggcgagctcaaagcaccgccttcccctctgctccggtacattgaagatcctgaaggggaa
ttggaacaaatgctttcagggtacgacgcgttagagaggacccttcagtacaggttcaag
gacaggtccctactgctgcaagctctgacgcatgcgtcgcaccagcagaacaggctcact
gactgctaccagcggctcgagttccttggcgacgccatactagactacctgatcacccgg
cacctgtacgaagaccctcgtcggcactccccgggtgccctcaccgatctgcgctccgcc
ctggtcaacaacaccatcttcgctacgctcgccgccagacacggcttccacaaatacttc
cgtcacatgtccccgggactgaacgaggtcctcacgagatatgtcaagatacaagaggag
aatggacactccatcagcgaagagcattacttaatccaagaagatgagatggagcaggct
gaggacgtggaagtgcccaaagcgctcggagatctgtttgaatcggttgcgggagctatt
ttcttagattctggtatgtccctgggtgcagtatggaagtcgtacgtgaaccttatgggt
gctgaactggaagcattcagcgcggctgcccccaagtcgcctgtcagggagctgcttgag
gccgagcccgatactgctaagtttgggaaaccggagcgcttggtcgacgggcgccgtgtc
cgcgtgtgtgtggaggtgttcgggcgcggtgcgtttaagggggtaggcaggaactaccgc
atcgcgaaggggaccgccgcgcgttgcgccctcagacacctcaagatccacaggcagcga
tga
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integrated database retrieval system
