KEGG   Pectinophora gossypiella (pink bollworm): 126379630
Entry
126379630         CDS       T09293                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
pgw  Pectinophora gossypiella (pink bollworm)
Pathway
pgw03018  RNA degradation
pgw03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pgw00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    126379630
  09123 Folding, sorting and degradation
   03018 RNA degradation
    126379630
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pgw03019]
    126379630
   03041 Spliceosome [BR:pgw03041]
    126379630
Messenger RNA biogenesis [BR:pgw03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     126379630
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     126379630
Spliceosome [BR:pgw03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    126379630
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 126379630
NCBI-ProteinID: XP_049884419
LinkDB
Position
29:5818576..5820748
AA seq 138 aa
MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEVIDMVKEETQVKARGRGEMNKGRGGQNMRTGRGGSRGAFGNRGRPA
PLSRGGGNTGRNPQNKKK
NT seq 417 nt   +upstreamnt  +downstreamnt
atgctgccgctgtcgctacttagaactgcacaaaaccatcctatgttagtagagttgaaa
aatggcgaaacttataacgggcatcttgttagttgtgataattggatgaatatcaacctt
agggaagttatctgcacatcacgagacggagacaagttctggaggatgcccgaatgctac
atcaggggcagtactattaaatatcttaggataccggatgaagtaatcgacatggtcaaa
gaggaaacgcaggtgaaagcgagaggacgtggcgagatgaacaaaggtcgtggtgggcag
aacatgcggacgggtcgcggcggcagccggggcgccttcggtaaccgcggccgccccgct
ccgctctcccggggcggaggcaacacgggtcggaatccacagaataagaagaaatag

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