Pectinophora gossypiella (pink bollworm): 126379635
Help
Entry
126379635 CDS
T09293
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
pgw
Pectinophora gossypiella (pink bollworm)
Pathway
pgw03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pgw00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126379635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgw03019
]
126379635
03036 Chromosome and associated proteins [BR:
pgw03036
]
126379635
Messenger RNA biogenesis [BR:
pgw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
126379635
Chromosome and associated proteins [BR:
pgw03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
126379635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup96
Nup98_GLEBS
Nucleoporin_FG
TPR_Sec16
Motif
Other DBs
NCBI-GeneID:
126379635
NCBI-ProteinID:
XP_049884427
LinkDB
All DBs
Position
29:3558628..3620166
Genome browser
AA seq
1874 aa
AA seq
DB search
MFNKPTFGSNTSGFGSFNTTAATASPFGGGFKPATGTFGAPTTFGANATQPATGGLFGAS
NTSTGLFGGSTSTATPAFGNTSAGFGFGASTSTGGLFGASNTSTGLFGNAQNTSAFGAKP
AGFGFGGTTAAATPGGGLFGASAAPSTGLFAQQGSTLGGGLFSNNTGTFGQQQATAGTAH
VKYNPVVGTDVVVKSGTSQTINIKHHCITCMKEYEGKSLEELRLDDYTAGRKGGGGGVFG
FQQQEAKPLFGGSTFGQTATTTASTVFGGGGLGATTGGFGQTNTFSFGSNAQSTTNTTGG
LFGAAKPAFGAASTTGTGLFGSTTTQAAPTFGTSSAPTFGFGSNTQPQTGGLFGAKPATT
GFGAPASTAGFGAFGGGGLFANKPQQTTAPTFGSAAPAFGSLSGGGFGANTSTTGTLFGG
GNTFGKPATSQPAFGFNTTNTGLGGGLGAGLGAPSFQAKPAAQPFSALGGGSLFQTQPAA
NFSAGKGLDSGLGGGGLFSNTSTLGGSSLGLGGLGANTSALANNNLSGASAAGNVHEQIL
TLVARPYGDSPLFKDLPPETAASTEVLKPTNPAAVKAVLDSSSPYRVTDSSARLKLRHPP
TTHDKKSLFDGLEESDATLEDKLSLKPSRKRLVLRPRSQDSDAEHISHRSLEDQPQNTSL
NGPPTKDADNNNSAAEEDRARKENSHYNENNNLETSSDRHGSWLSASKHQWSAEKEKPVE
NEPTPRLYPSLDKENPMQISSERRASWLTTKPLRKPLSSNPEAAENSVRDLGLRPADRSH
DKENVDTLSMTEEENAVTRDIPPHPTGVKLTRPGYYTIPSLDDMIKYMRSDGSCVVPHLT
IGRKNYGNVYYDCEIDVSGLDLDSLVHFLNKEVTVYPDDCDKPPVGEGLNRRAIVTLDRI
WPRDKTDKMPITDPHRLLAMDYEGKLRRVCDKHDTKFIEYRPQTGSWVFRVEHFSKYSLT
DSDEEDDPTPEVLKRQLVNNQLQKAAPIAPPKPPTQPTAGLGGLGGPMYSGLTPLAMSPL
YPTAGLAGPALVGHDDLYAMQQTSLNLLNGAGKAFEMDTTEDNTESQSLYQDSHRAYGVK
SPTSELARLEHRQSHNVQLMKASLYADTEMEDDTSVSTGDQQVPRVGSLLTGPPSVHRED
EYVTEDTPVMAAEAAEVALKPLIVRPHTIVLKYHRKVLPFKQTIAGRLDAAYIADMSVCR
GRHSRVGFGPSGAIVYPTSYDSISTLPRSADLCDLGRYVRGRSDDDWSEAVVARLAIGHP
DKNNNFVEMISRHLETLLQHSSCPAGGARAVACEPAARRAALAGLTRPYRHLQAAKHTYG
VSSSYCHEVFRLCEALWGADLDNDGIPGTDDASIVDRHRKLLEWLTAAVSESTDEELKTP
RSPEAEDETDTHSSRVWTLLLGGRVVEACKVAVEHGDCNMATLIAQCSGDPMFRSLVTRQ
ISLWRECGADKLMSSARMSSLQLVAASAPRDGLARADWLRALHATARYLCPQVPTLEQVV
RTYEGLFVDGQVGDEGVDLSAVRADEMGMRLPVPPYLEEYDVTLLNNGKHRRVLDLRYEL
IRARAMNTRPKLQPAMYTPDPMDYSLCFVLGAWFGCVTAESACGVAEQLEAAGAWHLAVQ
ALQYHPHDAARAHLIRGVLSRHAPAAADTAEQAARLQLLATLQVPQRWVLLAQAHRAKYL
HMPAVEAQHLVGAEQWNAAHKVLLEELLPDAVLGDDLQSIAPLVEKLNEAALRHEVSGWE
SGGQALYHYIHVCEEIRGLVSPAGGVGGAGARLAALRPRLAAACRALARLPGGGARRAAA
RTEMGARLLQLALAAGEPPHHLALLLKQLQLPPDTTATAMIQITTDLAERAADMCIESAE
SSPISSHHRAAAHS
NT seq
5625 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaacctacttttggttcgaacacttctggcttcgggtcgttcaacacgacg
gcggcgacggcgtctccgttcggcgggggcttcaagcctgccacgggcaccttcggagcg
cccaccacctttggcgccaacgccacccagccggctacgggaggtctcttcggcgcgtcg
aatacctcgactgggttattcggcgggtccacgtcgaccgcgacacctgccttcggtaac
acctcggccgggttcgggtttggggcgagcacgtcgacgggtggactattcggggccagt
aatacctctacagggcttttcggcaatgcgcagaacacttccgctttcggggccaagcct
gccggcttcgggttcggcggcacgaccgcggcggcgaccccgggcggaggcctattcggc
gcctccgccgcgcccagcacggggctgttcgcgcagcagggctccaccctcggcgggggg
ctcttctctaacaatactggtaccttcgggcagcagcaggcgacagcaggcaccgcccac
gtgaagtacaacccagtggtgggcacagacgtggtggtcaagtcaggcacctcgcagacc
atcaacattaaacaccattgcataacttgcatgaaggaatacgagggtaaatccttggag
gagctccgcctggatgactacacggcgggccggaagggcggcggcggcggcgtgtttggc
ttccagcagcaggaggccaagccgctcttcgggggctccacattcggccaaacagcgacc
acaacagcatcaactgtcttcggcggcggcggtctgggggccaccactggcggctttgga
cagaccaatactttctcgtttggaagcaacgcgcagagcaccacaaacacgacaggcggg
ctgttcggggccgctaaaccagcattcggtgccgcctctactactggtacgggcttgttc
ggcagtactacaacccaggcggcgcccaccttcggcaccagcagtgcgcctacctttggc
ttcggctccaacacgcaacctcagacgggtgggttgttcggcgcgaagccagcgacaacc
gggttcggtgcgccggcgagcacggcgggcttcggagccttcgggggcggaggcctgttc
gccaacaagccgcagcagacgaccgcgcccaccttcggatcagcagcgcctgctttcggc
tcactgtcgggcggcggttttggagccaacacgtcgaccacgggaacattatttggcggt
ggtaacaccttcggcaagccagccacctcccaacccgccttcggcttcaacaccacaaac
actggactcggtgggggcttgggtgcgggattaggcgccccctcgttccaggccaagccg
gccgcgcagccgttcagcgcgctgggcggcggctcgctgttccagacgcagcccgcagcc
aacttctccgcaggtaagggtctggacagcgggctggggggcggaggcctattcagcaac
acgtccacgctcgggggctcctcgctcggcctcggggggctcggggccaacacctcagct
cttgccaacaacaacctatcgggcgcatcggccgctggcaatgtgcacgagcagatactg
acgctggtggcgcgcccctacggagactcgccgctcttcaaggacctcccgccggaaact
gcggcgtcaacggaagtcctgaagccgaccaacccggcggctgtgaaggcggtcctggac
agttccagcccttaccgcgtcactgactcctcggccaggttgaagctcagacacccgccc
acaacgcacgataaaaagtccttgttcgacggcttggaggagtctgacgcgacgttggaa
gacaagctgagtctcaagccgagccgcaagcgactggtgctgcgcccgcgctcacaggac
agcgacgctgagcatataagccatagatctctggaggatcagccacagaacacgagcctg
aacgggccgccaaccaaagacgcggataacaacaattctgcggcagaagaagaccgcgcg
aggaaggaaaactcacactataacgaaaataacaacctggaaaccagttcggatagacac
ggcagttggttaagtgcatcgaaacatcagtggagcgcggaaaaagagaaaccagtggag
aacgaacccacaccgcgactgtatcctagtttggataaggaaaatccaatgcagatttct
tccgagagacgtgcgagttggttgacaacgaagcccctgcggaagcccctgtcgagcaat
cccgaggcggcggagaactcggtgcgagacctcggcctccgccccgcggaccgctcccac
gacaaggagaacgtcgacactctctcaatgacagaagaagagaatgcggtcacccgggac
atcccgccgcaccctacaggcgtcaagttgacccgccccgggtactacaccatcccttcc
ctggacgacatgatcaaatacatgcgctcagacgggtcgtgcgtggtgccgcacctcacc
atcggccgcaagaactatggcaacgtatactatgactgcgagatcgacgtctctggcctg
gatcttgattccctggtccacttcctaaacaaggaagtgacggtgtatccggacgactgc
gacaagccccctgtgggtgaggggctcaacagacgagcgatcgtcaccctcgaccgcatc
tggcctcgagacaagaccgacaagatgccaatcactgacccgcacaggttgttggcgatg
gactatgaaggcaagttgcgtcgagtgtgcgacaaacacgacactaagtttatcgagtac
cgcccgcagaccggcagctgggtgttcagggtggagcacttcagcaagtacagcctaacg
gactccgatgaggaagacgaccccacgcccgaggtgctgaagcgacaactggtcaacaac
cagctgcagaaggcggcgcctatagcaccacctaaaccgccaactcagccgacagcaggc
ctcggaggtctaggaggccccatgtactctggcctcacccctctggccatgagcccactg
tatcccactgctgggctcgccggccccgcgctggtggggcacgatgacctctacgccatg
cagcagacttcactgaacctcctcaatggagctgggaaagctttcgaaatggacaccaca
gaagacaatacggagtcccagagcctctaccaagacagtcatagagcctatggcgtcaag
agtcctacgagcgagttggcgcgtctggaacatcgacagagccataatgttcaactgatg
aaggcatccttatacgctgatactgaaatggaggacgacacgtcagtatcaacaggtgac
cagcaagtgccacgtgtgggctccctgctgaccggcccgccctccgtgcatagagaggac
gaatacgttactgaggacacgcctgtcatggccgctgaagctgcagaagtggcgttgaag
ccactcatagtgcgcccgcacactatagtcttgaagtatcacagaaaagttttgccgttc
aaacagactatagctggtcgccttgacgcggcttatatcgcggacatgtcggtatgtcgc
ggccgccacagtcgcgtcggcttcgggccctccggcgcgatagtgtatcccacttcctac
gactctatatctacgctgccgcgctcggcggatctatgcgacttgggccgctacgtgcgc
gggcgcagcgatgacgactggagcgaggcagtcgtcgccaggctagctataggacacccg
gataagaataataacttcgtggagatgatctcccgtcacctggagaccctgctgcagcac
tcgtcgtgccccgccggcggggcgcgggccgtggcgtgcgagccggctgcgcgccgcgcc
gctctagcgggcctcacgcggccctaccgccacctgcaggctgccaagcatacgtatgga
gtctccagttcgtattgccacgaagttttccggttgtgtgaagctctttggggcgctgat
ctggacaatgacggtataccgggcacagatgacgcgtctatagtggacaggcacaggaag
cttctagaatggctgaccgcggccgtcagcgagtccacagacgaggagttgaagaccccg
cgctcgcccgaggcagaagatgaaacggacacgcacagcagtcgcgtgtggacgctgctg
ctgggcgggcgggtggtggaggcgtgcaaggtggccgtggagcatggtgactgcaacatg
gccacgctgatcgctcagtgctcaggcgatccgatgtttcgttcattggtgactcggcaa
atttccctctggcgtgaatgtggcgccgacaagctgatgagctcggcgcggatgtcgtcg
ctgcagctggtggcggccagcgcgccgcgggacgggctggcgcgggctgactggctgcga
gccctgcacgccaccgccagatacttgtgcccgcaagtgccgaccctggagcaagtggtg
cgcacgtacgaggggttgttcgtggacggccaagtgggtgacgagggcgtggacttgtcg
gccgtgcgcgcggacgagatgggtatgaggctgcccgtaccaccgtacctcgaagaatac
gacgtgactctactcaataatggcaaacaccgtcgcgttctcgacttgcggtacgagttg
atcagagctcgcgctatgaacactcgacctaaactccagcccgctatgtacaccccagat
cctatggactacagcttgtgcttcgtgctgggcgcgtggttcggctgcgtgaccgcggag
tccgcgtgtggcgtcgccgagcagctggaagcggccggcgcctggcacctcgccgtgcag
gcgctgcagtaccacccgcacgacgccgctcgcgcgcacctgatccgcggcgtgttgtcg
cggcacgcgcccgccgccgccgacacggccgagcaggcggcgcggctgcagcttctggcc
acgctgcaggtgccgcagcggtgggtgctgctggctcaggctcacagggctaagtatctg
cacatgccggcagtggaagctcagcacctggtgggcgccgagcagtggaacgcggcgcac
aaggtgttgctcgaggagttactgcctgatgctgtgttgggtgatgatctccaaagtata
gcgccgttagtggagaagttgaacgaggccgcgttgaggcatgaagtgagcggctgggag
agcgggggacaggcgctttatcactatatacacgtttgtgaggagatccgcgggctggtg
tcgccggcgggcggcgtgggcggcgcgggcgcgcgtctggcggcgctgcggccgcggctg
gcggcggcgtgccgcgcgctggcgcgcctgccggggggaggcgcgcgccgcgccgccgcg
cgcacggagatgggcgcgcggctgctgcagctggcgctggccgcgggcgagccgccgcac
cacctggcgctgctgctcaagcagctgcagctgccgcccgacaccaccgccacggccatg
atacagatcacgaccgacctagcggagcgggcagcggacatgtgtatagagtcagccgaa
agttcgcctatctcctctcaccaccgcgccgccgcgcacagctag
DBGET
integrated database retrieval system
