Pectinophora gossypiella (pink bollworm): 126379874
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Entry
126379874 CDS
T09293
Name
(RefSeq) CCR4-NOT transcription complex subunit 2 isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
pgw
Pectinophora gossypiella (pink bollworm)
Pathway
pgw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126379874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgw03019
]
126379874
Messenger RNA biogenesis [BR:
pgw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126379874
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
126379874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
126379874
NCBI-ProteinID:
XP_049884805
EnsemblRapid:
LOC126379874
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All DBs
Position
Z:complement(22121407..22128675)
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AA seq
428 aa
AA seq
DB search
MSHLQTNKYHVMANLNFQQAPRSLASGGVGGRVSSGLVAGVSGHVTPTFGGALSPGRGST
AMPGGAPPSMASRSTLFGQRAFADRRVPMPTSLSQPNANSMWVRQSGMGNLSRFNAGSNY
HSVFGEGGDTSTPPLLDLSEFPSLTARGAGDQAPAAAPPPPGSKPYVGMVKQPTSEQSEF
TMSSEDFPALPGTSNTSGSATAQQPAATPASGHPAPDYANHSAEKPRKGIQTSPDGNVTN
IPGTMIPNQFGIVGLLTFIRAAESDPSLVSLALGQDLTALGLNLNSPDNLYLTFSGPWAD
TPCRPQDMDYHVPPEYLINGSIREKLAPLRLSRYKEDLLFYLFYCFVGDVLQIAAAAELY
NREWRYHTEEKVWISQAPGMPMVEKTSTYERGTYYFFDAHNWRKVAKEFHLDYSKLEGRP
QLPPHVLT
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgtcacatttacaaacaaacaagtaccatgttatggcaaacttgaatttccagcaagcg
cctagaagcctagcgagcggcggtgtgggcggtcgcgttagctccgggctggtggcgggg
gtgtcagggcatgtgacgccgacgttcggcggggcgctgtctccgggccggggctccacc
gcaatgcccggcggcgcaccgccctcgatggcttcgcgttccacgttgttcgggcaacga
gcattcgctgaccgcagagtaccaatgccgacctctttgtcgcagcccaacgctaattcc
atgtgggttcgacagtctggtatgggcaacctgtctcggttcaacgctgggagcaattac
cactcggtgttcggcgagggcggcgacacgtcgacgccgccactgctggacttgagcgag
ttcccctcgctgacggcgcgcggggccggcgaccaggccccggccgccgcgccgccgccg
cctggctctaaaccttacgtgggtatggtgaagcagccaacatcggagcagtctgagttt
acgatgtcgtcggaagatttccctgcgttgccgggcacgtcgaacacgagcgggtcggcg
acggcgcagcagcccgctgcgacgccggcgtctggccaccccgcgcccgactacgcaaac
cacagcgctgaaaagcccaggaaaggcatacagacatcgcccgacggaaacgtaacaaac
ataccagggactatgatccccaaccagttcggcatagtggggctgttgacgttcatccgc
gcggcggagtcggaccccagcctggtgtcgctggcgctaggacaagatctaactgctctc
ggattgaacctcaactcccctgacaacctttatctcactttttctggaccgtgggcggac
actccttgccgaccacaagacatggactaccacgtgccgcccgagtatttgattaacgga
tcgattagagaaaagctggcaccactgcggctgagtcgatataaagaagacttgcttttc
tatctgttttactgtttcgtcggtgacgtgcttcaaatagcagctgcagcagaactatac
aatcgtgagtggcgatatcatacggaggagaaggtgtggatctcgcaggcgcccggtatg
cccatggttgagaagacctccacctacgagcgcggcacttactacttcttcgacgcgcat
aactggcgcaaggtggcgaaggaattccacctagactacagcaagctggagggccgaccg
caactgccgccccatgtgcttacgtag
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