KEGG   Pectinophora gossypiella (pink bollworm): 126380080
Entry
126380080         CDS       T09293                                 
Name
(RefSeq) roquin-1
  KO
K15690  RING finger and CCCH-type zinc finger domain-containing protein
Organism
pgw  Pectinophora gossypiella (pink bollworm)
Brite
KEGG Orthology (KO) [BR:pgw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pgw03000]
    126380080
   04121 Ubiquitin system [BR:pgw04121]
    126380080
Transcription factors [BR:pgw03000]
 Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    126380080
Ubiquitin system [BR:pgw04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    126380080
SSDB
Motif
Pfam: Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-RING_UBOX zf-RING_2 zf-CCCH zf-C3HC4 zf-C3HC4_4 Vesi_VP2 PaaA_PaaC zf_CCCH_4 zf-RING_10
Other DBs
NCBI-GeneID: 126380080
NCBI-ProteinID: XP_049885245
LinkDB
Position
Z:641958..672300
AA seq 780 aa
MPIQAPQWTDYLNCPVCCREFGAPPRSPISLGCGHTLCRHCLKHLHRKQCPFDQTTILVD
PEELVVNTALLQLAGYTPPAQPYHPPCIQALPEHDRHAYDVIVRCMEHLAVYLKYCGTAN
NSVSGSRLSRPMQRKLVTLLQCAMTDEEGRGRAARAARSLGERTVTELILQHQNPQQLSA
NLWAAVRARGCQFLGPAMQEEVLKLVLLALEDGSALSRKVLVMFVVQRLAPHFPQASKTS
IGHVVQLLYRASCFKVSKRESDSSLMQLKEEFRTYESLRREHDAQIVQIATEAGLRIAPD
QWSALLYGDTAHKSHMQSIIDKLQTPQSFAQSVQELFIALQRTGDPAQLIVMSIHLDRLA
GIDASPDAKSPSWPQLADMMTSLKEVVSGLVHYLQQQAATRDNNHNRSSNTQDRCTEPST
SQPSPQASSTTPTHSKYKVSMCRDAATRSFCPRGNACTFAHSEEELERYRSMPSGGGGGA
AATNGNYTYLPPMQGALPMPPVPQNMPLPQPMYPRYPLHPPHMDNFNVPPPMPSMPPQQM
PPQQLPPQQLPPQQMPPDMHAAQEYPDAPHNVDNMPPPSYPNPMLHNQPPPMPLNQNGMM
LPLPERPFYGRFGNMMPIHEEPNNMPYPRAEYPGPVYQGPSVYQQEQNLQPPIPNIFVSV
PHDTQRNISPYSFDDLPSELLPEYRVKPPTYVPVQRERRPDPPWPPANDVFNFDGMRNTI
PHCSATADDMFNVQGDRRVVGADRLAAGAADLANRADDQELEEELQALERRIDTEFKSAD
NT seq 2343 nt   +upstreamnt  +downstreamnt
atgccgatccaggcgccgcaatggacggactatctcaactgtccggtgtgctgccgcgag
tttggtgctccccctagaagccctatcagtcttggctgtgggcacactctctgcagacac
tgcctcaaacatctccaccggaaacaatgcccattcgatcagacaacaatcctggtggac
ccggaggagctggtggtgaacacggcgctgctgcagctggcggggtacacgccgcccgcg
cagccctaccacccgccctgcatccaggcgctgcccgagcacgaccgccatgcctacgac
gtcatcgtgcgctgcatggaacaccttgccgtctacctcaagtattgtggaacagcgaac
aacagcgtgtcgggcagtcggctatcgcggccgatgcaacgcaagctggtgacgctgctg
caatgcgcaatgaccgacgaggagggccgcgggcgggcggcgcgggcggcgcgctcgctc
ggcgaacgtaccgtcactgaactcatacttcaacaccagaaccctcagcagttgagcgcg
aacctgtgggcagcggtgcgggcgcgcggctgccaattcctgggcccggcgatgcaggag
gaagtcctcaagctggtactcctcgccttggaagatggctccgcgttgtccaggaaggtc
ttagtgatgtttgtagtccaaagattggcacctcactttccgcaggcttccaaaactagt
ataggccacgtcgtccagctcttgtaccgggcttcttgttttaaggtgtcgaagcgcgag
agcgactcgtctctcatgcagctgaaggaggagttccgcacgtacgagtcgctgcggcgc
gagcatgacgcgcagatcgtgcagatcgccaccgaggccgggctgcgcatcgcgcccgac
cagtggagcgcgctgctctacggcgacaccgcgcacaagagccacatgcagagcattatc
gacaagttgcaaacgccgcagtctttcgcgcagtccgtacaggagctgttcatagcgctg
cagcgcaccggcgaccccgctcagctgatcgtcatgagcatacacctcgacaggctcgcc
ggcatcgatgctagtcccgacgccaagagcccgagctggccgcagctggcggacatgatg
acctcactgaaagaggtggtctccgggctggtgcactacctgcagcagcaggcggcgaca
agagacaacaaccacaaccgcagctccaacacgcaggaccgctgcaccgagccctccacc
agccagccttcacctcaggcgtcttcgacgacgccgacacacagcaagtacaaggtgtcg
atgtgccgcgacgctgccacgcgctccttctgcccgcgcggcaacgcctgcacattcgcg
cactccgaggaggaactcgagaggtacaggtctatgccgagcgggggcggcgggggcgct
gcggcaaccaacggcaactacacgtacctgccgccgatgcagggtgcgctgccgatgccg
ccggtgccgcagaacatgccgctgccacagcccatgtacccgcgctacccgctgcacccg
ccgcacatggacaacttcaatgtgccaccaccaatgccgtcgatgccgccgcagcagatg
ccgccgcagcagttgccaccgcagcagttgccgccgcagcaaatgccgccggacatgcat
gctgcgcaggagtaccccgacgcgccgcacaacgtcgacaacatgccacctccgagctac
ccaaacccgatgttgcacaaccagccgccgccgatgccgctcaaccagaacggcatgatg
ctgcccctgcccgagaggcccttctacggccgcttcggtaacatgatgcccatccacgag
gagcccaacaacatgccctacccgagggcggagtaccctggccccgtctaccaaggcccg
agtgtctaccaacaggaacagaacctgcagccgcccataccgaacatcttcgtctcggta
ccgcacgacacgcagagaaatattagcccgtattcttttgatgatttgccatcggagtta
ctgccggagtacagggtgaagccgccgacgtatgtgccggtgcaacgcgaacgccgcccc
gacccgccctggccacccgccaacgacgtatttaatttcgacggtatgagaaacacgata
ccgcactgttcggccaccgccgatgatatgttcaacgtgcaaggagacaggcgagtggtc
ggcgccgaccggctggcagctggcgcggctgacctcgccaacagagctgatgatcaggag
ctggaagaggaactccaggcacttgaacgccgcatcgatacggagttcaagagcgcggac
taa

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