Pectinophora gossypiella (pink bollworm): 126380233
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Entry
126380233 CDS
T09293
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
pgw
Pectinophora gossypiella (pink bollworm)
Pathway
pgw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126380233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgw03019
]
126380233
Messenger RNA biogenesis [BR:
pgw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126380233
mRNA degradation factors
3'-5' decay
Pan complex
126380233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
Motif
Other DBs
NCBI-GeneID:
126380233
NCBI-ProteinID:
XP_049885455
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All DBs
Position
Z:15215971..15230793
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AA seq
605 aa
AA seq
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MDPSIFLQYSPPNGLPQESKLATYMNRSATTPTRSLNQALGKVSLESSPTSIKKILIGEF
VPLNYFSPANILPDSPESSPPSTLAIPTSHPPQVHQENVGGTTYFYSTNADGLSGTGPQH
PAAMAESCIGPGVVGPTAGASPYGQQMYPGTPTHMGPMTSKPGLASTFYMPETIRAEIYQ
RNDDIFLTTDLRQYPDLPENVEMYSELTPLEGAAPHAMATSFRATHRASAEHYALRRLHS
FAGVPTKRLELWKQIDHPNIIRLHDVFTTKAFGDHSMMLVYDYHPACVTLMNKYLSGGGG
GAVTDGNGAFHDPFSSDPDAPRPYTHQKNAMLRAVACGALLPEAVLWSLLVQLTAALRAI
HTAGLACRSLDPTKVVMNGCRVRIAWCGVADALHPNTNDVGQAQQDDLTALGRLALALAC
RTIHCDNLPASMELVARTYSADLKNLILYLLSTSAARRSVTDLMPMIGARFYNQVEALER
RADAFEEQLAREIDNGRLLRILIKLGIVNERPELNMDASWSETGDRYMLKLFRDYLFHSV
SEDGRPWLDQAHIAHCLNQLDGGSIEKVELMSRDEQSVLVVSYAELKHCLEQAFEEVMQA
SAPLP
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggatccctctatatttttgcaatactctcctcccaatgggctgccccaggagtcgaag
ttagcgacgtacatgaaccgttctgccacaactccaacaaggtcgttaaatcaggcatta
ggtaaggtcagtttggagtcatcaccaacttctatcaaaaagatactgattggtgagttt
gtgccactcaactacttcagcccggcaaacatcctgccggactcaccagagagttcacca
ccatctacattggctatccctaccagccatccaccacaagttcaccaggagaatgttgga
ggtacaacatatttctactctacaaacgcagatgggctcagtggcactggacctcaacat
cctgctgctatggcagaatcctgcatcgggccgggcgtggtagggcctactgccggagcc
tcgccctacggccaacagatgtacccggggacccccacacacatgggtcctatgacttcc
aagccaggtctggcgtcaacgttctacatgcccgaaaccatacgtgcggagatctaccag
cgaaatgatgatatctttctaactactgacctgcgtcagtaccctgacctgccagagaac
gtggagatgtactcggagctgacgccgctagagggtgcagcgccgcacgcgatggcaacg
tcgttccgcgccacgcaccgcgccagcgccgaacactacgcgctgcgccgcctgcactcc
ttcgccggtgtccccaccaagcgtcttgagctatggaagcagatcgaccaccccaacatt
ataagactccatgatgttttcactactaaagcgttcggcgatcactcgatgatgttggtg
tacgattaccacccggcatgcgtgaccttgatgaacaagtacctgtcgggcggcggcggc
ggcgcagtcaccgacggcaatggcgccttccacgaccccttctcttcggacccggacgcg
ccgcgcccttacacgcaccagaaaaacgcgatgttgcgtgcggttgcgtgcggcgccctg
ttgcccgaggcggtgctatggagcctgctggtgcagctgacggccgctctgcgcgccata
cacaccgccggactggcttgcaggagcctagaccccactaaggtggtgatgaacgggtgt
cgagtgcgcatcgcgtggtgcggtgtcgctgacgccctgcaccctaacaccaatgacgtt
ggacaggcgcaacaagacgacttgacggccctggggcggctggctctggcgctggcttgc
cgcactatccactgcgataacctgcccgcctccatggagctggtggcgcgcacctactcc
gccgatctcaagaacctcatactgtatttgctctccacgtcagccgctcgccgctccgtc
actgatctcatgcctatgattggagctcgcttctacaaccaggtagaagcgctagagcgt
cgtgcggacgcattcgaggagcaactggcgcgagaaatcgacaacggcagactcctgcgc
atactgatcaagttggggatagtcaacgaacgtccagaactgaacatggacgcgtcgtgg
tcggaaacgggtgaccgctacatgctgaagctgttccgcgactacctgttccactcggtg
agcgaggacgggcggccgtggctcgaccaggcacacatcgcccactgcctgaaccaactc
gacggcggctccattgaaaaggtggagctgatgtcgcgcgacgaacaaagcgtactggtg
gtgtcgtacgcggaactgaagcactgcctggaacaggcgttcgaggaagtgatgcaggcc
tcggctccgctcccctag
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