Pectinophora gossypiella (pink bollworm): 126380565
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Entry
126380565 CDS
T09293
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
pgw
Pectinophora gossypiella (pink bollworm)
Pathway
pgw03022
Basal transcription factors
pgw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pgw00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126380565
09124 Replication and repair
03420 Nucleotide excision repair
126380565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgw03021
]
126380565
03400 DNA repair and recombination proteins [BR:
pgw03400
]
126380565
Transcription machinery [BR:
pgw03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
126380565
DNA repair and recombination proteins [BR:
pgw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
126380565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Motif
Other DBs
NCBI-GeneID:
126380565
NCBI-ProteinID:
XP_049886020
LinkDB
All DBs
Position
Z:19236985..19253815
Genome browser
AA seq
581 aa
AA seq
DB search
MTTSSEDVLLSVSYVRYKKGDGTLYVMNQRLAWMLENRDTVAVSHKYADIKAQKISPAGK
SKVQLQVVLHDGTCSTFHFVNPAGPKAQAKERDQVKSLLQMLLPKFKRQIDGELEMKSRI
LSLHPTLKHLYEDLVISKVINSEEYWNTPTLKNYTENTNTNQEAGVSGAFLADIQPQTDG
CNGLKYNLTQDVIDAIFKTYPAVRKKHIDYVPNKMTEAEFWTKFFQSHYFHRDRIASSSS
KDLFGECAKMDDHAISSAMKHTTLDMTVDLPQFSEPVPLLPAEEEPPQEKERGDNTSIHR
NMIKRFNQHSIMVLKASHKTNCNNNNNNSNSNKNSNHNNNKIVENGRIKETNGVAEKRHK
TAEETCDGEQPEKKKRILEKIHYEDLENSNKSEEAQELKLSKIERYLLGPSSQINQMNAI
TNSSPPLSALASICQAWSNGQQCQRPVRLSAAAAVGALGELSPGGALMRQHHAASMAQLI
PADVKAELHRIYLSGGELLRELWRCFPQPGSAADTEDTVVRAEKFYEALLRFRNVKLRPF
EEKMLRDLTPLATSLTKHMNQMIDTACSKYVVWQQRQAKLR
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgtcttcggaggacgtgttgctcagcgtaagctacgtgagatataaaaaggga
gatggtacattatatgtgatgaaccagaggttggcttggatgttggaaaatcgtgataca
gtagctgtgtctcacaagtacgctgatatcaaagctcaaaaaatttcacctgctggtaag
agtaaggtacaactgcaagtagtattacatgatgggacgtgttccacgttccatttcgtt
aatccagcgggtccaaaggcacaagcaaaagagagggaccaggtcaagtcattgttgcaa
atgttacttcccaagttcaagagacaaattgatggagagctggaaatgaaatctagaata
ctgtcactccatccaaccctgaagcatttatatgaggatctcgtgatatcaaaagtgata
aacagtgaggagtactggaatactcctactctgaaaaattatacagaaaatactaatact
aaccaggaagcaggtgtgtctggagcttttttagctgacatacagccacagacggatgga
tgtaatggtctcaagtacaatctcactcaagatgttatagatgcaatatttaaaacatat
cctgctgttaggaagaaacatattgactatgttcctaacaaaatgaccgaagctgaattc
tggactaagttttttcagtcccattattttcatagggaccgaatagcatcatcttctagt
aaagatttattcggcgaatgtgctaaaatggacgaccatgcgatttcatctgccatgaaa
catacgacactagacatgactgtggatttgcctcaattctcggaaccagtgcccctcctt
ccagccgaagaagaaccgccccaagaaaaagaacgaggggacaacacgtcaatacatcgt
aacatgattaagcgattcaatcaacattcaataatggtgctcaaagctagtcataaaaca
aattgtaataataataataacaacagcaatagcaataaaaattcaaatcataataataac
aaaatcgtcgagaatggcagaataaaggaaaccaatggtgtagcggagaagcggcataaa
actgcggaggagacatgcgatggcgaacaacccgagaaaaagaaaagaatattggaaaag
attcattacgaagacttagaaaattcaaataaatcagaagaggcacaggaactaaagtta
tctaagatagaaagatatttactaggaccatcttcgcaaatcaaccaaatgaacgcaatt
acgaacagctcacctccgttatcggcattggcttctatttgtcaggcgtggtcgaacggt
cagcagtgtcaaagaccagtaaggctgagtgcggcggcggcggtgggtgcgcttggtgag
ctcagtcccggtggcgccctcatgcggcaacaccatgcagcttcaatggcacaactaatt
ccagcagatgtgaaggcagagctgcatcgcatatatttgtccggtggtgagttgctgcgg
gagctctggagatgtttcccgcagccggggtcagccgcggataccgaggacactgtagtc
agagccgagaaattttacgaggccctgctacgatttaggaatgtgaaattgaggccattt
gaggagaaaatgctcagagaccttacccctcttgctacatcgttgacgaaacatatgaac
cagatgatcgatacggcttgctcaaaatacgtagtttggcaacaaagacaagctaaacta
cggtag
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