Pectinophora gossypiella (pink bollworm): 126381734
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Entry
126381734 CDS
T09293
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
pgw
Pectinophora gossypiella (pink bollworm)
Pathway
pgw03030
DNA replication
pgw03410
Base excision repair
pgw03420
Nucleotide excision repair
pgw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pgw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
126381734
03410 Base excision repair
126381734
03420 Nucleotide excision repair
126381734
03430 Mismatch repair
126381734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgw03032
]
126381734
03036 Chromosome and associated proteins [BR:
pgw03036
]
126381734
03400 DNA repair and recombination proteins [BR:
pgw03400
]
126381734
DNA replication proteins [BR:
pgw03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
126381734
DNA Replication Termination Factors
ELG1-RFC complex
126381734
Chromosome and associated proteins [BR:
pgw03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
126381734
DNA repair and recombination proteins [BR:
pgw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
126381734
Check point factors
HRAD17(Rad24)-RFC complex
126381734
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Rep_fac_C
DNA_pol3_delta2
RCF1-5-like_lid
AAA_16
AAA_22
AAA_30
Mg_chelatase
bpMoxR
AAA_24
Gp44_lid
RuvB_N
AAA_11
Rad17
AAA_lid_RFC1
SLFN-g3_helicase
AAA_19
AAA_3
DUF815
AAA_5
Effector_1
nSTAND_NTPase5
AAA_assoc_2
AAA_7
DUF3373
Motif
Other DBs
NCBI-GeneID:
126381734
NCBI-ProteinID:
XP_049887149
LinkDB
All DBs
Position
3:11312323..11316476
Genome browser
AA seq
351 aa
AA seq
DB search
MQAFLKTGKISASDKPTTSGAKATTKKKPPAPWVEKYRPKTIDDIVDQGEVVQVLRECLS
GGDLPHLLFYGPPGTGKTSAILAAARQLFGDITRDRVLELNASDERGIQVIRDKVKSFAQ
LTVSSTRPDGRPCPPYKLVILDEADSMTNAAQAALRRTMERETRTTRFCLICNYVSRIIP
PITSRCSKFRFKPLARENVIKRLQEICTAEGVEVGDGTILHQAVDTCEGDLRRALTALQC
CQRLLGQITADGLIEVTGLVPEKLVNEYLSVKNYSELEQFVDKFLMEAYSASQLLEQLSA
TVVTAGHLTNKQKCEISEKVAVCSHRLLDGGAEVMQLTDLGCTIIMANNNP
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcctttctgaaaacaggaaaaatttcagcatctgataagccaacaacatcaggt
gctaaggctactacaaaaaagaagcctccagcaccatgggttgagaaataccgtcccaag
actattgacgacatagtcgaccaaggagaagtagtgcaagtgttgagggagtgtttgtct
ggcggagatttaccgcacttgctgttttacgggccacctggtacgggtaaaactagcgca
atccttgcggcagccagacagctttttggagatataactcgtgaccgggtgctagaactc
aatgcttcggacgagcgaggtatccaggtcatcagggacaaggtgaagagtttcgcgcag
ttgactgtcagtagtaccaggcctgatgggagaccgtgtcctccatacaagttggtgatc
ctggacgaggcagattccatgacgaatgctgctcaggccgcactgcgccgtaccatggaa
cgagagacacgcacaactcgtttctgtctgatctgtaactatgtgtcaagaatcattcca
ccaatcaccagccgatgctctaagttccgattcaaaccattggccagagaaaatgttata
aaaagactgcaagagatttgcacagcagaaggcgtggaagtgggtgacgggaccatactc
caccaggccgtggacacgtgcgagggtgacctgcgccgcgccctcaccgcgctacagtgc
tgccagcggctgctggggcagatcaccgctgacggactcattgaggtaacagggcttgta
cctgagaagctggtcaatgaatacctgagtgtcaagaactacagcgaattggagcagttt
gttgataagtttttaatggaggcgtactcggcgtcgcaactgctcgagcaactgagcgcg
actgtcgtcaccgccggccacctcactaataagcagaaatgcgaaatcagcgagaaagtg
gcggtatgttctcatcggttgctggacggaggagccgaggtgatgcagctcacggacctt
ggatgcaccatcataatggccaacaataacccctga
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integrated database retrieval system
