Pectinophora gossypiella (pink bollworm): 126382001
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Entry
126382001 CDS
T09293
Name
(RefSeq) ATP-dependent helicase brm isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
pgw
Pectinophora gossypiella (pink bollworm)
Pathway
pgw03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pgw00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
126382001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgw03021
]
126382001
03036 Chromosome and associated proteins [BR:
pgw03036
]
126382001
Transcription machinery [BR:
pgw03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
126382001
Chromosome and associated proteins [BR:
pgw03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
126382001
Chromatin remodeling factors
BAF complex
126382001
PBAF complex
126382001
GBAF(ncBAF) complex
126382001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Bromodomain
BRK
HSA
SnAC
ResIII
QLQ
HDA2-3
DEAD
NirdL-like_HTH
Motif
Other DBs
NCBI-GeneID:
126382001
NCBI-ProteinID:
XP_049887632
LinkDB
All DBs
Position
3:complement(5709130..5732399)
Genome browser
AA seq
1678 aa
AA seq
DB search
MASPSPQNSPMPPPQAPSPMGPPTQSPAPPHSPHSPYNGPPSTHPPAPGQPPMPNHMSPS
GPPIPPNSNGPPGVPPQHPGMPPGGHPMPSHMVGPHMQGPPGHPPHPPGPNGHPSMPGGQ
HPNMPVQGPPHGYMQHQIGHMPPGQAPLPMGGGPPPPGNGPSGAGGGGMGMTGALHAAAH
MPPHHAMLPAGAAPGYVGSAPQPHPPHPHPHPQHPQHPPHPPAAQTPPHPAAASGNCAPP
ASSPMQGSLPAPGPDNLNALQRAIDSMEEKGLQEDPRYSQLLALKARSNSQDPNKGLFSN
IQLSQLKAQITAYRNLARNQPVPQQIAMLAAGKRSAEAPPDCPTPPSQPPSPYSQQGQGQ
GPPPTPGGAGGAGKAGEPRGGGGGGAPPTPLPMTGQMAPPTQPTPPLVNPPLVGAPPMRG
PAPGVRPPGPGGPGGQPTQQPGVPTPGAKQNRVTSIPKPPGIDPLQILNERENRIAARIA
HRIEMLSSLPANMPDDLRLQAQIELRALRVLNFQKQLRAEILGQVRRDTTLETAVNIKAY
KRTKRQGLREARATEKLEKQQKLEAERKRRQKHQEFLQTVLQHAKDFKEFHRNNVSKLSR
MNKAIMNYHANAEREQKKEQERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDE
YIASLTEMVKQHKQEQRKKQQEEERRKRELRKKQEEEERRKLKSRKRKLLEGGDIDALDD
SSQTSDSRVSVMDPKTGEVLKGDEAPLLSQLKDWMETHPGWEVLSDSEDSGDDSQDDDEK
RERREKRDEKSDKEKTEEEKARDMIKKAKVEDDEYKTEEQTYYSIAHTVHESVTEQASIL
VNGKLKEYQIKGLEWLVSLFNNNLNGILADEMGLGKTIQTIALVTYLMEKKKVNGPFLII
VPLSTLSNWVLEFEKWAPTVSVVSYKGSPASRRLVQAQMRSTKFNVLLTTYEYVIKDKGV
LAKVQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPHRLLLTGTPLQNKLPELWALLNFLL
PSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLP
DKVEYIIKCDMSGLQRVLYKHMQSKGVLLTDGSEKGNKGKGGAKALMNTIVQLRKLCNHP
FMFQHIEEKFCDHVGTGGGVVSGPDLYRVSGKFELLDRILPKLKQTGHRVLVFCQMTQCM
TIIEDYLGWRGFQYLRLDGMTKAEDRGELLRKFNDAHSEYFIFLLSTRAGGLGLNLQSAD
TVIIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVI
QAGMFDQKSTGSERQQFLQSILHQDGDDEEEENEVPDDDLINEMIARSEEELEIFKQIDA
ERKKTETQSRLIEESELPDWLVKDDDEVVCNKGQGWNYVDEDETLGRGSRQRKEVDYTDS
LTEKEWLKAIDDEFEEEEEEDDDDEVLDKKRKKGRKRRRQDDSEEEEVPSSSKKKNKTEA
NLLKKRLKNVMKKVIDYADENGRVLSEPFMKLPSRRELPDYYDVIKKPLDIKKIMTRIED
GKYNEIADLERDFFTLCANAQTYNEEASLIYEDSVRLRNVFIEVRRRYEAGQNSDDSDDN
DKGTKKAAPPPAEEDDSDGESNRSVKMKIKLKGKGKSTPSRKRKQRKYISDDEDYEED
NT seq
5037 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcccttcgccgcaaaacagtcccatgccgcctccgcaggcgccaagcccgatg
ggacctccgacgcaaagcccggcccctcctcactcgccacatagtccttacaacggacca
ccatcaactcatccacctgctcccggacagccaccgatgcctaaccatatgtctccatcg
gggccgcctataccaccaaacagtaatgggcctcctggcgtaccaccacagcaccctgga
atgcctcctggtggtcaccctatgccttctcatatggtaggaccccatatgcaaggtcct
ccgggtcacccgccccatccacctggccctaatggccatccctccatgcctggaggccag
catcctaacatgcctgtacagggacctccacatggatacatgcaacatcaaattggccat
atgcctcctggacaggctcctctgccaatggggggaggtcctccgccaccggggaacgga
ccgagcggcgccggcggcggcggcatgggcatgacgggcgcgctgcacgcggccgcgcac
atgccgccgcaccacgctatgctgccggccggcgccgcgcccggctacgtgggctccgcg
ccgcagccgcacccaccacacccgcacccgcacccgcagcatccacagcacccgccgcac
ccgcccgccgcgcagacgccgccgcaccccgctgccgcgtccggaaactgcgcgccgccc
gcctcgtcgcccatgcagggctcactgccggcgcccggcccggataacctcaacgctcta
cagcgcgcgatagattccatggaggagaagggactccaggaagacccgagatactctcag
ctactcgcgctcaaggcgcggtccaactcgcaggatccgaataaggggctgttttcgaat
atacagctcagtcagctcaaggctcagataacggcgtaccgcaacttggcgcgcaaccag
ccggtgccgcagcagatcgccatgctggcggccggcaagcgcagcgccgaggcgccgccc
gactgccccacgccgccctcgcagccgccatcaccctacagccagcaggggcagggccag
ggtccgccgccgacgccgggcggcgcgggcggcgccggcaaggcgggcgagccgcgcggc
ggcggcggcggcggcgcgccccccacgccgctgcccatgacggggcagatggcgccgccc
acacagcccacgccgccgctcgtcaacccgcccctggtcggtgctcctccgatgcgcggg
cctgcgcccggtgtgcggccgccgggccccggtggcccaggtgggcagcccacgcaacag
ccgggtgtgcctactccaggtgctaagcagaatcgtgtcactagtatccccaaacctccc
ggtatagatccgttacagatactgaacgagagagaaaataggatcgcagcacgtatcgcg
caccgcatagaaatgctgtccagtttgcctgccaacatgcccgatgatctgcggcttcaa
gcacagatcgaactgcgagccctgcgagttctcaacttccagaagcaactgcgagccgag
attctagggcaagtccgccgcgatacgacgctagagacggctgtgaacatcaaggcgtat
aagcgtaccaaacggcagggactgcgcgaggcccgcgctacggagaagctggagaaacaa
cagaagctagaggcagagaggaagcgccgacagaagcatcaggagttcctccagacagtc
cttcaacacgcaaaggatttcaaggagttccaccgcaacaacgtgtcaaagctgtcgcgt
atgaacaaggcgatcatgaactaccacgccaacgccgagcgcgagcagaagaaggaacag
gagcggatagagaaggaacgtatgcggcgtttgatggccgaggacgaagagggttacagg
aagcttatcgaccagaagaaagacaaacgtctcgcgttcctcttgtcccagacggacgag
tatatcgccagtctcacggagatggtcaaacagcacaagcaggaacaacgcaagaagcaa
caggaggaagaacggaggaaacgggaactgcgcaagaagcaagaggaggaagagcgcagg
aaactgaaatcgaggaagaggaagcttctggaaggcggcgatatcgatgctttggatgat
agctcgcagacttcagactctcgagtcagcgtcatggatccgaaaacgggcgaggtgctg
aagggcgacgaggccccgctgctgtcccaactgaaggactggatggagactcaccccgga
tgggaggtgctgtccgactctgaggactctggagacgatagccaagatgacgacgagaag
agagagagaagggaaaagagagatgagaagagtgacaaggaaaagactgaggaagaaaag
gcgcgcgacatgatcaagaaggctaaagtcgaagacgatgagtataagacggaggaacag
acttactacagcatcgctcacacggttcacgagtctgtcacggaacaagccagcattttg
gtcaatgggaagctaaaagagtaccagatcaagggtttggaatggctggtatctctgttc
aacaacaatctaaacggtatcctggcggacgagatgggtcttggcaaaaccatccagacg
attgcactggtaacctacctgatggagaagaagaaagtcaacggtcctttcttaattatt
gtgccgctcagtacgctatcaaactgggtgctagagttcgagaagtgggcgccaacggtg
tcggtggtgtcgtacaagggctcgcccgcctcgcgccgcctcgtgcaagctcagatgcga
tccaccaagtttaacgtgctgctcactacctacgaatacgttatcaaggataaaggcgtg
cttgctaaggtacaatggaagtacatgataatcgacgagggacaccgtatgaagaaccac
cactgcaagttgacgcaggtgctcaacacgcactacatcgcgccgcaccggctgctcctc
acgggaacgccgctacagaacaaactgcccgaactgtgggcgctactcaacttcttacta
ccttctatcttcaagagctgctccactttcgaacagtggttcaatgcgcccttcgctact
actggtgaaaaggtggaactgaatgaggaagaaactatcttgatcatccgtcgtctgcac
aaagtgctgcggccgttcctgctgcggcgactgaagaaggaggtggagagtcagctgccg
gacaaagtggagtacatcatcaagtgcgatatgagcggtttgcaacgagtgctttacaag
cacatgcagtcaaagggcgtgctgctaacagacggctcagaaaagggcaacaagggtaag
ggcggggcgaaggctctgatgaacacgattgtgcaactacggaagctgtgcaaccatccc
ttcatgttccaacacatcgaggagaagttctgcgaccacgtcggcacgggcggcggggtc
gtgtctgggcctgacctctaccgcgtgtccggtaaattcgaactgctcgaccgcatattg
ccgaagctgaagcagacgggccaccgcgtgctggtgttctgtcagatgacgcagtgcatg
accatcatcgaggactacctcggctggagggggttccagtacttgagattggacggtatg
accaaggcggaggaccgtggcgagctgctgcgcaaattcaatgacgcacactcggagtac
ttcatcttcctgctatctacccgcgctggaggcttggggctgaacctccagagcgctgat
actgtcatcatattcgactctgattggaacccgcatcaggatctgcaagcgcaagatcgc
gcgcatcgtatcggacaacgcaacgaggtgcgagtgttgcgactcatgacagtgaactct
gtcgaggagcgtatcctagctgccgccaggtacaaattgaatatggacgagaaagttatc
caagctggtatgttcgaccagaagtcgacgggctccgagcggcagcagttcctgcagagc
attctgcatcaggacggagatgacgaagaggaggagaatgaggtccccgacgacgacttg
atcaacgagatgatcgcgcggtcggaggaagagttggagatcttcaagcagatcgacgcc
gagcgcaagaagacggagacacagtcgcggctgatcgaggagtcggagctgcccgactgg
ctcgttaaggacgacgatgaagtcgtctgcaataagggccaaggctggaactacgtagac
gaagatgaaacgttgggtcgtggctcccgtcaacgcaaggaggtggactatacagactcg
ttgacggagaaggagtggctgaaggccatcgacgacgagtttgaggaggaggaggaagag
gatgacgacgatgaggtgctcgataagaaacgcaagaagggacgcaagcgccgtcgtcaa
gatgattcagaagaagaagaagtgccgagttcgtctaagaaaaagaacaagacggaagcg
aacttattgaagaaacgactgaagaacgtcatgaagaaagtcatcgactacgctgacgag
aacggccgagtgctgtcggagccgtttatgaagctgccgtctcgccgcgaactgcccgac
tactatgacgtcatcaagaaaccactcgatatcaagaagatcatgacgaggatcgaagac
ggaaaatataacgagatagctgacttggagcgtgacttcttcactctatgcgcgaacgct
cagacttacaacgaggaagcgtcgcttatttacgaggattctgtgcgtttgcgcaacgtt
ttcatagaagttcgccgccgatacgaggccggacagaactcggatgactctgatgacaac
gataaaggtacgaagaaagcagcgccaccaccagcggaagaagacgattcggacggggaa
tcgaaccgctctgtcaaaatgaagatcaagttgaagggcaagggcaagagcacgccatcg
cgcaagcgcaagcaacggaaatacatctccgatgacgaggactatgaagaagattaa
DBGET
integrated database retrieval system
