Pseudanabaena galeata: OA858_02675
Help
Entry
OA858_02675 CDS
T09044
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
pgx
Pseudanabaena galeata
Pathway
pgx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OA858_02675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgx03019
]
OA858_02675
Messenger RNA biogenesis [BR:
pgx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
OA858_02675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RMMBL
RNase_J_C
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
WGS72948
LinkDB
All DBs
Position
complement(583518..585416)
Genome browser
AA seq
632 aa
AA seq
DB search
MTTSNAPALKIIALGGLHEIGKNTWVFEYNDEIMLLDGGLSFPDNMMPGVNVVLPDMTYL
RENKHKIKGMIVTHGHEDHIGAISFHLKQFEIPVIYGPRLAMALLEDKLREAGVLNRTEL
RRVMPRDIVRVGTNFFVEFIRNTHSIADSFSIAINTPAGMVIHSGDFKIDHTPVDGEFFD
LARLAEHGEKGVLALISDSTNAERPGITPSERAVYPNLEKYIMMAKGRVIITTFASSVHR
VNMILDIADKQGRVVGVVGRSMLNVIAHARNLGYIKCRDDLFQPLQNLRHYRDDQILILT
TGSQGEPMSALTRMSLCSHRQLEVRQGDTVIFSANPIPGNTIPVVRTIDRLMALGANVIY
GNDKGIHVSGHGSQEEHKMMLALVRPKFFFPAHGELRMLRQHARMAEAMGIPSENIVIAE
NGDVVEVCQDYMKIVDKVPSGVELVDSSRDGMVKGDVLRDRQQISGEGIFSIAVSVGLDG
KLATSPDIQLSGVVLPMEHSQIISLVAKAIDNSLSNSWGNFARNVGSLEVDWTGLRGQLE
RDLTRVLRQQIQSKPVIVFLLQTPPNSTQSAPVPAAKPNALGVTLKAGSGKVIPKIENGS
NGNVTTANSEVVTTTGAATASAGRRKRTAATV
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgactacatctaatgcaccagcactcaaaatcattgccctcggcggactccatgaaatt
ggcaaaaatacatgggtatttgaatataatgacgaaatcatgctccttgatgggggcttg
tctttccctgacaacatgatgccaggagtaaacgtcgtattgcctgatatgacttatctg
cgagaaaacaaacataagatcaagggtatgatcgtcacccacggtcacgaagatcatatc
ggtgcaatttcattccatttgaagcaatttgaaattcctgttatttatggtcctcgctta
gcaatggctttgctggaagataaacttcgtgaagcaggtgttctaaatcgtaccgaactc
cgccgtgttatgccccgcgacattgtccgtgttggtactaacttctttgtagaattcatt
cgcaatactcactcgatcgccgatagtttctcgatcgccattaatacacctgcggggatg
gtgattcactctggagatttcaaaattgaccatacgcctgttgatggcgaattctttgat
cttgctcgtcttgcggaacatggcgaaaaaggcgtattggctttgattagtgactctact
aatgctgaacgtcctggaattacgccttcggaaagggctgtatatcctaaccttgagaaa
tacatcatgatggcaaaaggtcgagtgattatcaccacctttgcctcttctgtacatcgt
gtgaacatgattttggatatcgctgataagcaaggtcgggtagttggcgtggttggcaga
tcgatgcttaacgtcattgcccatgcgcgtaatcttggttacatcaagtgccgcgacgac
ttgttccaacctttgcaaaatctacgtcattatcgtgacgatcaaattctaattttgact
actggttctcaaggtgagccaatgtcagcattgacaagaatgtccctttgcagccatcgt
caattggaagtacgtcaaggcgacactgtaatcttctctgctaatccaattcctggcaac
acgattcctgtggtgcggacgattgatcgcttgatggctctaggggctaatgtgatttat
ggtaatgacaaaggtattcacgtttcaggacatggatctcaagaagagcataagatgatg
cttgcccttgtacgtccaaagttcttcttccctgctcacggtgaattgagaatgctcaga
caacatgcaaggatggcggaagcaatgggcatccctagcgaaaatatcgtgattgccgaa
aatggtgatgtggttgaagtttgccaagactacatgaaaattgtcgataaggttccctct
ggtgttgaactagttgattcttctcgcgatggcatggttaagggtgatgtattgcgcgat
cgccaacagatttctggtgaaggcatcttctcgatcgccgtatccgttgggctggatggc
aagcttgccacatcccctgatattcaactaagcggtgtggttctaccaatggaacattcg
cagattatttctctagttgctaaggcgatcgataattccttgtccaattcttggggtaac
tttgctcgtaatgttggttctctagaagttgactggactggcttacgtggacaacttgag
cgcgacctcacccgtgtcttgcgccaacaaatccaaagcaaaccagtaatcgtgttccta
ttacaaacacctccaaattctacgcaatctgcacctgttccagccgcgaagcctaatgct
ttgggtgtgactttaaaagcaggtagcggcaaagtgattcctaagattgagaatggaagt
aatggtaacgttacgactgcgaatagtgaagtagttactactacaggtgcggcaacggcg
agtgctggtagacgcaagcggactgcggcaaccgtctaa
DBGET
integrated database retrieval system
