Pseudanabaena galeata: OA858_06905
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Entry
OA858_06905 CDS
T09044
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pgx
Pseudanabaena galeata
Brite
KEGG Orthology (KO) [BR:
pgx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgx03400
]
OA858_06905
DNA repair and recombination proteins [BR:
pgx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OA858_06905
Archaeal homologous recombinant proteins
OA858_06905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_27
SbcC_Walker_B
AAA_15
Rad50_zn_hook
AAA_21
AAA_29
ABC_tran
XhlA
ATP13
TTD
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
WGS73755
LinkDB
All DBs
Position
1493827..1496838
Genome browser
AA seq
1003 aa
AA seq
DB search
MIPQKLRLKNFLSYQQLALDFSGLHVACICGANGAGKSSLLEAISWAIWGVSRVASQDDV
IHVGSKEAQVDFTFIAGGEVYRIIRTRSRNSSTSLEFQVQSEGKFKSLTERKVQSTQQTI
ISHLKMDYETFVNSAYLRQGRADEFMLKRPSDRKQILADMLSLSQYDELAERAKDIARTS
KGESAVLENMLVHLREQIQDGEKIAPQLELLRSQLVELQAWESRDRARLQIVEDLQKQYQ
NLSQQLIWQQQQQTAITSNLSQIDRQLSSQRRQLQQLELCIATRSQILQNYERYQLLSTQ
ESELERKFQKYQHLCDRRGEFSHKLASLQSELKGQLRHYQAQLESLVQQESDLKGILSRA
TEIEAAIAELHKARAILQEFDRLHAQSTPLVHRHQVLKHQLEREQTKLAAKLDELVSKRE
QLYLQVKNHDQLLINAKELDRQIVLLQNKQVYQQRVHEKGLERRDFLERLKTRLADSEAA
FNKLEAKMRQLTVPNAPCPLCDRPLDEAHWQLVQKKHKQESRDLQADIWVVKEQQAASNC
EIEVLREEYRVLKKELAPLNDLIQRKGTLQEQLKAIAEAQQRLVLIDAEIVDLGDRLQTQ
NYMRDAWEEMELIDKNIHKFAYDEKNHALARGDVERWRWAEIKQSELKNAQRQADNLSQK
IPDLQTKINQLQDRLTKNLIDLEVQHELEQCDRALTQLAYEPDRHQQLRTQKQELTPSLL
RYQELTRAEQEYPELQQQVEHLQQTQSANQQELQNITTQISQLQSQIQAVHGNHVQEINS
LRQNLQNWRSQMDVLLAQIGSLQQAQQQLELSRQREQETLTQIEAARQRQRIHTELYQAF
GKNGIQALMLENVLPQIEVEANQILAQLSDRQLNVRFITQKSGKKSDRIIETLDIEIADT
KGTRPYETYSGGEAFRINFAVRLALSRVLAQRKGSTLQTLIIDEGFGSQDPLGCDRLVSA
INAIAPDFECILVITHMPQMKEAFNTLIEVSKGEEGSTVQLVG
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgatccctcagaaattacgattaaaaaatttcttgagctatcaacaattagccttagat
tttagcgggctacatgttgcttgtatttgtggcgcaaatggggcgggaaagtcttcgtta
ttagaagcgatttcttgggcgatttggggtgtaagtcgtgtggcaagccaagatgatgta
attcatgtgggttccaaagaagcacaggtggacttcacttttatcgcaggtggtgaagtc
tatcggatcatcaggacgcgatcgcgcaatagttcaacttctttggaatttcaggtgcag
agtgaaggaaaatttaaatccttgactgagcgaaaggtgcaatcgacgcagcagacaatc
atttcgcacctgaaaatggattacgaaaccttcgttaattcggcatatttgcgtcaaggt
cgcgccgatgaatttatgctgaagcgtcctagcgatcgcaagcagattttggcggatatg
ctgtcgctgtcacagtatgacgagttggcggaacgagccaaagatattgcgcgaactagc
aaaggtgaatcggcagttttagagaatatgctggtacacctgcgggaacaaattcaagat
ggagaaaagatcgcaccgcagttagaacttttgcgatcgcaattagtcgagttgcaagca
tgggaaagtcgcgatcgcgcccgattgcaaatagtggaagatttgcagaaacaataccaa
aacctttcacagcagttaatttggcaacaacaacaacaaactgcaattactagcaatctg
tctcaaatcgatagacaactctctagtcaacgccgacaattacagcaattagagttatgt
atagcaacgcgatcgcagattttgcaaaactatgagcgctatcaattgctatccacacag
gaatcagaattagagcgtaagtttcagaaataccaacatctttgcgatcggcgtggcgaa
tttagccataaactcgcgagtttgcaaagtgaacttaagggacagttaaggcattatcaa
gcgcaattagagtctctagttcagcaggaaagtgacttaaaagggattctcagtcgtgct
accgagatcgaagcggcgatcgctgaattacacaaagcaagggcgatattacaagaattt
gatcgcctccatgctcaatccacaccgctagtgcatcgtcatcaggttcttaagcatcaa
ctagaacgggagcagacaaaacttgcggcaaaactagatgaattagtttctaaacgcgaa
cagttatatttacaagtcaaaaatcacgatcaattactgatcaatgcgaaggagctagat
cggcaaattgttttattacaaaataagcaagtctatcaacagcgtgtccatgaaaaaggg
ttagaacgtcgtgattttttggaacgcttaaaaaccagactagctgatagtgaggctgcc
tttaataaattggaagcaaaaatgcgtcagttaactgtgccaaacgcgccttgtcccctc
tgcgatcgccctcttgatgaagcgcattggcaattagtgcagaaaaagcataaacaggag
tctcgcgatctgcaagcagatatctgggtggtgaaggaacagcaagcggcttccaactgt
gaaattgaagtgttgcgagaagagtatcgcgttttaaaaaaggaactcgcaccgttaaat
gatttgattcaacgtaaggggactttgcaggagcaactgaaggcgatcgcggaagcacag
caaagactagtcctcattgatgcggagattgtggatttaggcgatcgcctccaaactcaa
aactacatgcgtgacgcatgggaggaaatggaactgatcgataagaatattcataaattc
gcctacgatgaaaaaaatcatgccttagctcgtggtgatgtcgagcgctggcgctgggct
gaaatcaagcaatcagaattaaagaatgctcagcgtcaagccgataacctgtcccaaaaa
attcctgatctgcaaaccaaaatcaaccaattgcaagatcgtctcaccaaaaatctcatt
gatttagaagtacagcatgaactcgaacaatgcgatcgcgcccttacccaactagcctac
gaacccgatcgccatcaacaactccgcacccaaaaacaagaactaactccgtcattactg
cgctaccaagaactcactcgtgccgagcaggaatatcctgaacttcagcaacaggttgag
catttacaacaaactcaaagcgccaatcaacaagagttacaaaatattactactcaaatt
tctcaactacagtcacaaatccaagctgtacatggcaatcatgtacaggaaattaactcc
ttgcgacaaaatttacaaaattggcgatcgcaaatggatgtactcctagcccaaattggt
agccttcagcaagcccaacaacagctagagctaagtcgtcaacgcgaacaagaaaccctc
actcaaatcgaagcagcccgtcaacggcaacgtattcacaccgagctttatcaagctttt
ggcaaaaatggcattcaagctttaatgctggaaaatgttttgccacaaattgaagtagaa
gccaatcaaattctcgctcaactaagcgatcgccaattaaacgtaagattcatcacccaa
aaatctggcaaaaaaagcgatcgcatcatcgaaactctcgacattgaaattgccgatact
aagggaactagaccctatgaaacctattcgggcggcgaagcctttcggattaactttgcc
gtgcgtctggcgctctcccgtgtgcttgctcagcgcaaaggcagtactctccaaacccta
attatcgatgaaggattcggcagtcaagacccattgggatgcgatcgccttgtcagtgcc
attaatgcgatcgcgcccgattttgagtgcattctcgtaattacacatatgccgcaaatg
aaggaagcctttaacacattgattgaagtatcgaagggagaggaaggttccactgtgcag
ttggttggataa
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