Pseudanabaena galeata: OA858_09500
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Entry
OA858_09500 CDS
T09044
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
pgx
Pseudanabaena galeata
Pathway
pgx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pgx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
OA858_09500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgx03021
]
OA858_09500
03400 DNA repair and recombination proteins [BR:
pgx03400
]
OA858_09500
Enzymes [BR:
pgx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
OA858_09500
Transcription machinery [BR:
pgx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
OA858_09500
DNA repair and recombination proteins [BR:
pgx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
OA858_09500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_4
RNA_pol_Rpb1_3
Apocytochr_F_C
RPN1_C
Motif
Other DBs
NCBI-ProteinID:
WGS74239
LinkDB
All DBs
Position
2081726..2085703
Genome browser
AA seq
1325 aa
AA seq
DB search
MADFTTSNTDSPEEKKPQRFINSTIDKGQLKKLIAWAFTHYGTTSAANVADQLKALGFRY
ATQAGVSISIDDLQVPASKKALLAAAEQEIEETESRYTRGEITEVERFQKVIDTWNVANE
NLKDEVVKNFKSNNPLNSVYMMAFSGARGNISQVRQLVGMRGLMADPQGEIIDLPIKTNF
REGLTVTEYIISSYGARKGLVDTALRTADSGYLTRRLVDVSQDVIVRENDCGTTRGIKLK
AMRDGEKTLIKLSDRLFGRVAAEDIVDPNTGEVIVMRNQEISEDLSLAAQKAGVEEVCVR
SAFTCESTRSVCQMCYGWSLAHAELVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVFTG
EVAEQQRAPYDGTIKYNKKLKVRPMRTRHGEDAFIVESNGDFTLESSEGKKVYAITQGST
LLMRDGQKVSQNQLMAEVSITGKTSRKTTEKATKALNTGLAGEVLFSDLAIEEKKDRQGN
TSYVARGEKGRVWVLAGEVYDLPPTAEPTVKNETYVTEGDVLAETRLITEHGGVVRLSEE
DSRHNREVEIITASVVLDQAIVKEESYQGREHYVLETQGGQSFSLKASPGSKLINNQVVA
ELIDDTYQTKSGGIIKFAGVEVAKRSKGKQGYEVVKGGTLLWVPEETHEVNKDASLLMVE
ENQFIEAGTEVVKDIFSQTAGVVEVFQKNDILREIVIKPGDLHLVDDPQTAMQKNGTLAQ
PGTEIMPGLTSPELRYVEYLDSTEGPALLLRPVEEYQVPDVPTVPSQESVNQEGRSIGLR
AVQRIPYKDGDRVKAIDSVELLKTQLLLEVDTDAPQLAADIEFIPNDSDPGSLRLQLVIL
ESLVIRQDNSGDPAHTNSRTRLLVNDGDRIDPGAVVARTEILCKRPGQIRGIRQGAEVVR
RLLVVTEADCITTPCPNPTVQAGDLLRSGDEIGEGVITEESGQVLKVEDGSVVFRIGRPY
LVSPGALLQIHDADLVQRGDNIALLVFERAKTGDIIQGLPRIEELLEARKPKEMCVLART
TGTAQVTYDSDDNPEVKILGDDGVLDDDYSFNAGQSVIISDGQKLLAGEALTDGPANPHD
ILDIYFHAYKESLGVRQAALIGLQKVQEFLMNEVQSVYQSQGVDISDKHIEVIVKQMTSK
VRIEDGGDTTRLPGELVELHQVEQINEAMEITGGAPADYTPVLMGITKASLNTDSFISAA
SFQETTRVLTEAAIEGKSDWLRGLKENVIIGRLIPAGTGFNAYDTPIVDVDNGYEPDLGY
DEEADDVIIDDNTARNYQIIEPRIEPIRVVDKPRSRRSFDDELVDDDVEFDDDDEEDDDD
FEDED
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
atggcagatttcacgactagcaacacggattcgcctgaagaaaagaagcctcagcgcttt
atcaatagcaccatcgataaggggcagttgaagaagttaattgcttgggcttttacgcat
tatggaacaactagcgccgccaatgttgctgaccaattaaaagcactaggctttcgctat
gcaactcaggctggcgtatcaattagtatcgacgatttacaagttcctgctagtaagaaa
gctttgctagcggcggctgagcaagaaatcgaagaaaccgaaagccgttatacaaggggc
gaaattaccgaggtcgaacgtttccaaaaggtaattgatacatggaacgtggctaatgag
aacctcaaggatgaggtggtgaaaaactttaagagcaataaccctcttaactcggtatac
atgatggcgttctctggagcgcgtggtaacatctcgcaggtgcgtcagctagtcggtatg
cgtggtttgatggctgatccgcaaggggaaattatcgatttaccgattaagacgaatttc
cgtgaagggctgacagttaccgaatatattatttcctcctacggtgcgcgtaaaggactc
gtagatacagcgttacgcacggctgactctggatatcttacccgtcgtcttgttgacgta
tcgcaggatgtgatcgttcgtgagaatgactgtggtacgactcgcggcattaagctcaaa
gcgatgcgcgatggggaaaagaccttaatcaagttgtccgatcgcctatttggtcgggtg
gcagccgaggatattgtcgatcctaatacgggcgaagtgatcgtcatgcgtaatcaagag
atttcggaagatttatccttggcagcacaaaaggctggagtcgaagaagtttgtgtgcgc
tccgcctttacttgcgaatcgacgcgatcggtttgtcagatgtgctatggctggagcttg
gctcatgctgagttggtagatattggcgaagcagtaggtatcatcgccgcccagtccatc
ggtgaaccaggtacacagctaactatgcgtactttccacacaggtggtgtatttactggg
gaagttgctgaacaacaacgcgctccctacgatggcacaatcaagtacaacaaaaagctg
aaagtccgccccatgcgtactcgtcacggtgaagacgcattcattgtggaatccaatggt
gactttaccctagaaagttctgaaggtaagaaagtctatgcgattacccaaggttcgaca
ttgttgatgcgtgatggacagaaagtatctcaaaatcaactgatggctgaggtatccatc
acaggtaaaacttctcgcaaaaccacagaaaaggcgacaaaagcgctgaatactggtttg
gcaggtgaagtattattctcggatctggcgatcgaagagaaaaaagaccgtcaaggtaac
accagctacgtcgctcgtggtgaaaaaggacgggtttgggtcttggctggtgaagtctat
gacttgcctccaacggctgagccaactgtgaaaaatgaaacctatgtcacagaaggtgat
gtccttgcggaaactcgcttgattacagagcatggcggtgtcgtacgtttgagtgaggaa
gatagtcgccataaccgcgaagtcgaaattattacggcttcggtagtattggatcaggcg
atcgttaaagaagaaagctatcaaggtcgtgagcattatgttctggaaactcaaggtggt
caaagcttctcgctcaaggcttctcccggttccaaactgatcaataatcaagtcgttgcc
gaactgattgatgatacttaccaaactaagagtggcggtattatcaagttcgcaggtgtg
gaagttgctaagcgcagtaagggcaagcagggttatgaagtcgtcaagggtggcactttg
ctctgggttcctgaagaaacccatgaagtgaataaggatgcttccctattgatggtggaa
gagaatcagttcattgaggctgggacagaagttgttaaggatatcttcagtcaaaccgca
ggggtggtggaagtattccaaaagaatgacattctgcgcgaaattgtgatcaaaccaggt
gatttacatcttgttgatgatccacaaactgccatgcaaaagaatggcactttagctcaa
ccaggcacggaaattatgccaggattgacttccccagaactgcgctatgtggaatatctg
gactcgacggaaggtcctgccttgctattacgtcccgtggaggaatatcaagttcctgat
gtgccaacggttcctagccaagaatcggtcaaccaagaaggtcgttcgattggattacgg
gctgttcagcgtatcccttacaaggacggcgatcgcgtcaaggcgatcgatagcgtggag
ctactcaagactcaactattactagaagttgacaccgatgcccctcaattggctgcggac
attgagtttattcctaatgacagcgatccaggtagcttgcgtttgcaattggtaattctc
gaatccttagtgattcgtcaagataactctggcgaccccgctcacaccaactcacgcact
cgtttgctagtaaatgatggcgatcgcattgatccaggtgcagttgttgctcgcacggaa
attctctgtaagcggcctggtcaaattcgtggtattcgtcaaggggcagaagtagttcgt
cgtttactggttgttaccgaagcagattgcatcaccacaccttgccctaatcccacggtg
caggctggagatcttttgcgatcgggtgatgaaataggtgagggcgtgattaccgaagag
tcgggacaagttctcaaggtagaagatggctccgtcgtatttcggattggtcgtccttat
ctggtatcccctggtgcattgttgcaaatccatgatgctgaccttgtgcaacgtggtgac
aacattgccctgctagtatttgaacgagccaaaactggagatattattcaaggtttgcct
cggattgaggaactcctcgaagcacgtaagccaaaggaaatgtgtgtacttgcgcggaca
acaggcactgcccaagtcacctacgactcagacgataatcctgaagtgaagattcttggc
gatgatggcgttcttgatgatgattattcattcaatgcgggtcagagtgtgattatctcc
gatggtcagaagcttttggctggtgaagcactcaccgatggtcccgccaatccccatgat
attctcgatatctatttccatgcttacaaggaatctctgggtgtcagacaagctgccctc
attggattacaaaaggtacaagagttcttgatgaacgaagtccaatctgtataccaatct
caaggtgtagacatttccgataagcacattgaagtaatcgttaaacagatgacttctaag
gtacgcatcgaggacggtggtgatacaactcgtctccctggggaactagtagaactccat
caagttgaacaaatcaacgaagcgatggaaattacaggtggcgctcctgcggactatacg
cctgtgttgatgggtattaccaaggctagtttgaataccgatagctttatctcggcggcg
agtttccaagagacgactcgtgttcttacggaagcagcgatcgaaggtaagtctgactgg
ttgcgtggcttgaaggagaacgtcattatcggtcgtttgattcctgctggtacgggcttt
aatgcttatgacacgcctatcgtggatgtcgataatggctatgagccagatctcggctat
gacgaagaagcggatgatgtaatcattgatgacaatactgcacgtaattatcaaatcatt
gagcctcgaatcgagccaatccgagttgtcgataagcctcgcagtcgtcgtagctttgac
gatgagctagtggatgatgatgtggagtttgatgatgacgatgaggaagatgatgatgat
tttgaggatgaagactaa
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