Pseudanabaena galeata: OA858_12755
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Entry
OA858_12755 CDS
T09044
Name
(GenBank) ribonuclease R
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
pgx
Pseudanabaena galeata
Brite
KEGG Orthology (KO) [BR:
pgx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pgx03016
]
OA858_12755
Enzymes [BR:
pgx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
OA858_12755
Transfer RNA biogenesis [BR:
pgx03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
OA858_12755
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GFIT
Motif
Pfam:
RNB
HTH_RNase_II
CSD_RNase_II
Motif
Other DBs
NCBI-ProteinID:
WGS70598
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All DBs
Position
2820497..2822578
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AA seq
693 aa
AA seq
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MEKGTLVEVKLHGDRRLVVIDRPEGKKHFQAIDENGNTHTIHPREINYTIKASGENSSFT
HLQIPSFLQKVEKFLDPSSLEVAWEILIEDNQATNPNDLANLLFSELSAVTSYASYCLLS
NDKIYFKQKGDLYEPRSSSQVSELKHQADAAAQRAKLIEEFQQKLTAKLSGGDVAWTTSD
RSRLDCLERYALYGDEASDKAAAQELLSFAKRSKNEQAAFQMLVDLGIWSEHENLNLLRS
QIPIRFANELIAAAQECFTAPIPDNMGDLRRDLTHLHVYTIDDISTTEIDDGLSIETLAD
GRKRIWIHIADPTRWLDPESPLDKDARKRGTSVYLPTGVIPMFPIELAAGPMSLIENKIC
HAMSFAVDLDEVGAVANYEIVASLVKPNYRLTYEDVEEMLQLGVEDDLDRLADFARLRKK
WRVDQGAIEIHLPDTSVKVDSKNGDRLTLELMEDTFSRQLVAEMMILAGEVAAKFAQTNN
IPIPYRYQEQPELPPLDTLMQLPSGPVREFAICRCMTKGSLGLYASRHSGLGLDAYAQVT
SPIRRYSDLLAHWQIKAFLRGESLPFTAEMLTAILQAIDPAIWDANQVEKQSVRYWSLEY
LRRNKDVVWEALMLDWLRENEKLALVLIEDLGLKLPMRINRQIQVGDNLRIKTGEVDPRK
DIIYFQEAQQSTSVLEMEMERDSDRLESEFATL
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaaaggtacgctagtcgaagtgaaattgcatggcgatcgccgccttgtcgtaatt
gatcgtcctgaaggtaaaaaacactttcaagcgatcgatgaaaatggcaatacccacacc
atccatccccgcgaaattaactacaccatcaaagctagtggtgaaaattctagtttcacc
catctgcaaatcccctcatttttgcagaaagttgaaaaatttctcgacccttctagccta
gaagtcgcatgggaaattttgatcgaagataaccaagctacaaatcccaatgatctggca
aatcttctattctcagaattatctgcggttacttcctacgcatcctattgcttattaagt
aatgacaaaatttactttaagcaaaaaggcgatctctatgagccacgctcaagctcacaa
gtctccgagttaaaacatcaagctgatgctgcggctcaaagagctaaattaatcgaagaa
tttcagcaaaagctaactgccaagctttcaggtggtgacgtagcatggacaactagcgat
cgcagtcggttagattgtctagagcggtatgctctttatggtgatgaagcctcagacaaa
gctgcggctcaagagctgttaagttttgccaaacgttctaaaaatgaacaagctgctttc
caaatgctcgttgatctcggtatttggagtgagcatgaaaatcttaatttgctgcgtagc
cagattccgattcgctttgccaatgaattgattgctgccgcccaagaatgtttcactgca
ccaattcctgacaacatgggagacttgcggcgcgatctcacccatctacatgtttatacg
attgacgatattagtaccacggaaattgatgatggtctgagtattgagacgctagcggat
ggacgtaaacgcatttggattcatatagctgatccgacaagatggctcgatcctgaaagt
cctctggataaagatgctcgtaagcgcggaacaagtgtctacttacccacgggcgttatc
cccatgtttccgattgagctagcggctggccccatgagtttgattgaaaacaaaatctgt
catgcgatgtcttttgctgtcgatctggatgaagtcggcgcagttgctaattacgaaatt
gtggcaagtttggtgaagccaaactatcgcctcacctatgaagatgtcgaagaaatgcta
caactcggtgtggaggacgatctcgatcgccttgctgactttgcccgtctccgcaaaaaa
tggcgcgttgatcaaggtgcgatcgaaattcatttacccgataccagcgttaaggttgac
tctaagaatggcgatcgcctcaccttagaactgatggaagataccttctcgcgtcaactg
gtcgccgagatgatgatccttgcaggtgaagtcgccgccaaattcgcccagaccaacaat
attcccatcccctatcgttatcaagaacagcctgaattgccacccctcgatactttgatg
caattgccatcgggtcccgtgcgtgaatttgcgatttgtcgctgcatgactaaaggttca
ttagggctgtatgcgtcgcgccattcaggtttaggtctggatgcctatgcacaggtaact
tcaccaattcgtcgttatagtgatctactagcccattggcaaatcaaagcttttttgcgc
ggggagtctttgccttttacggcggaaatgctcacggctattctgcaagcgatcgatcct
gcgatttgggatgctaatcaggtcgagaagcagtcggtacgttattggagtttagaatat
ttgcgccgcaacaaagatgttgtgtgggaagcgctgatgctggactggctacgtgaaaat
gaaaagctggcactagtgctgattgaggacttaggcttgaagttaccgatgcgaattaat
cgccagattcaagtgggcgataatctccgcattaaaactggtgaagtcgatccccgcaaa
gacattatttatttccaagaggcgcagcaatctacctcagtgttagaaatggaaatggag
cgagacagcgatcgccttgaatctgaatttgcaactctgtaa
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