Pseudanabaena galeata: OA858_13570
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Entry
OA858_13570 CDS
T09044
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pgx
Pseudanabaena galeata
Pathway
pgx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OA858_13570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgx03019
]
OA858_13570
03009 Ribosome biogenesis [BR:
pgx03009
]
OA858_13570
Enzymes [BR:
pgx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
OA858_13570
Messenger RNA biogenesis [BR:
pgx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
OA858_13570
Ribosome biogenesis [BR:
pgx03009
]
Prokaryotic type
rRNA helicases
OA858_13570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
HEM4
Cas3-like_C_2
AAA_19
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
WGS70755
LinkDB
All DBs
Position
complement(2995479..2997011)
Genome browser
AA seq
510 aa
AA seq
DB search
MPSSFLSLGISEARVAKLESIGFTEPTAIQEQAIPQLLAGADVLGQAQTGTGKTAAFALP
ILERLDLTNDSLQALILTPTRELAIQVGQALRSFNTKPGAKILTVYGGSDISRQMVQLER
GVHVVVGTPGRVIDLMERGKLKLEHLAWFVLDEADEMLNMGFIQDVERILVTTPSTKQST
FFSATMPPAVKRLVKNFLKSPVTVKVETQDSTPTRIDQQIYLVPYHLTKEEALLPVLEYE
APTSAIIFVRTKDSASRLTEILQSSGHSVDEYHGNLSQSQRENLLRRFRNQQVRWVVATD
IAARGLDIDGLTHVFNLDIPDDPERYVHRIGRTGRAGKKGIAITLISGKERYKLRQLEQQ
VGMPLPPQPLPNVAQIQERRIGRFTEQILEALSGERLASFLPLVSQLVEDYDPQAIAAAA
LQLAYTQLQSDKAEQAALQVLAKQPHSPSGGRDRDGGGYNSGRPIKRGQSGYRGDGGGGR
SGGGGREGGYDSRRPTRSGDRDRSSAPVKY
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgccctcatcttttctttctctcggtatttctgaagcacgagttgctaagctcgaatcg
attggctttacagagcctacagctattcaagaacaagcaattcctcaactgctcgcagga
gcagacgtacttggtcaagctcaaactggtactggtaaaacagcagctttcgctctgcca
attttagagcgcttagacttgaccaacgactcattacaggcgttgattttaactccaact
cgtgaattggctattcaagttggtcaagcgctacgtagctttaacaccaaacctggtgca
aagattctcactgtatatggtggatctgacatcagtcgccaaatggttcaattggaacgt
ggtgtccatgtagtcgttggtactcctggacgtgtcattgatttgatggaacgtgggaag
ctaaaactagagcatcttgcttggtttgttttggatgaagcggacgaaatgctcaatatg
ggcttcattcaagatgtcgaaaggattttggtaaccactccttctactaaacaaagtact
ttcttctcggcaactatgcctcctgcggtaaagcgcttagtcaagaatttcttgaagtct
cctgtaactgtcaaggtggagactcaagattctactcctacccgtattgatcaacagatt
tatcttgttccttatcatttgactaaggaagaggctctgttacctgtattggaatacgaa
gctccaacttcagcaattatctttgtacgcactaaggattcggcaagccgtctgactgag
attctacaatcttctggtcacagtgttgatgaatatcacggcaacctctctcagtctcag
cgcgaaaatctactgcggcgcttccgtaaccaacaagtacgttgggttgttgcaactgac
attgctgcccgtggtttggatattgatggtttgactcacgtatttaaccttgatattcct
gatgatcctgagcgctatgttcaccgtattgggcgcactggtcgcgctggcaaaaaggga
atcgcgattactctgatttctggaaaagagcgctacaagttgcgtcaattggaacagcaa
gtgggaatgcctttgcctcctcagccattgcctaatgttgctcagattcaagagcgtcgc
atcggtcggttcactgagcaaattctagaggctctgtctggcgagcgtttggcttcgttc
ttacctttggtatcgcaattggttgaggactatgatcctcaagcgatcgctgccgcagct
ttacaacttgcctatactcaactgcaatctgataaggctgaacaagctgcattgcaagtt
ttggctaagcaacctcacagtccttctggtggacgagatcgcgatggcggtggttacaac
agtggtagaccaatcaagcgtggtcaaagtggttatcgtggagatggcggcggtggtcgt
tcaggcggcggtggtcgtgagggtggatatgactctcgtcgtcctactcgttctggcgat
cgcgatcgttcttcagctccagttaaatactag
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