Pseudanabaena galeata: OA858_16050
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Entry
OA858_16050 CDS
T09044
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pgx
Pseudanabaena galeata
Pathway
pgx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OA858_16050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgx03019
]
OA858_16050
03400 DNA repair and recombination proteins [BR:
pgx03400
]
OA858_16050
Enzymes [BR:
pgx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OA858_16050
Messenger RNA biogenesis [BR:
pgx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
OA858_16050
DNA repair and recombination proteins [BR:
pgx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
OA858_16050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
WGS71220
LinkDB
All DBs
Position
complement(3528852..3530291)
Genome browser
AA seq
479 aa
AA seq
DB search
MTEIFREWTEVRQTFQKIWGYDDLRPSQRTVVTSLLRKQDCLAIMATGGGKSICFQLPAV
INEGLTLVISPLLALMEDQVRDCKSRNLPAACLHSNLSQIERREVLRNLPNTSLLYVSPE
TLLSEPVWEKLSDRQLKISGLMLDEAHCLVQWGDSFRPSYRRLGAVRSALIAQKPDHHPP
ISLAAFTATADRDTTAELQACLNLENPQIVRTSPYRPQLSLQVAIAWTPAGRKSRALKFI
RDRKGQSGLIYVRSRRDAEMLATWLQENSFKTAAYHAGLPPQERRHIEQQWLTNQYPFVI
CTSAFGLGINKPDTRWVLHFHPPLTLSEYIQEIGRAGRDGKPAEALMLVSEPTGLLDDSD
RQRVNFFLQQQQKIQQQALALLPKLPKQGNFAEVAKLHPDAAIALGLLHRAGHLTWKTPF
IYEIHSLHNQQQKLKQQMGDQSKIAQMQAYSCVKGNRWAFLLDNFGFEEESKLLLKSRS
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaatatttagagaatggacggaagttcgacaaacatttcagaaaatatgggga
tatgacgatctgcgcccatctcagcgcacagtagtaaccagtttgctaaggaaacaagat
tgtttggcaattatggcgacaggaggcggcaaatctatttgttttcaattgcccgcagta
atcaacgaaggattaaccttggtgatttctccattacttgccctgatggaagaccaagtt
cgagactgtaaatcgagaaatctcccagccgcttgtttgcatagcaatttatcacaaata
gagcggcgtgaggttttgcgaaatcttccaaacacgagcttgctttatgtttcaccagaa
accctcttgagtgagcctgtctgggaaaaactcagcgatcgccaattaaaaatttcagga
ctaatgcttgatgaagcccattgtctggtgcagtggggagactcatttcgaccgagctat
cgtcgtttaggagccgtgcgatcggctctgatcgctcaaaagcccgatcatcacccaccc
atatctctagcagcatttacagccaccgccgatcgcgacacgactgcggagttgcaagct
tgtttaaatctagagaatccccagattgtgcgtaccagtccctatcgtccccaactcagt
ctccaagtggcgatcgcatggacacccgcaggacgcaaatcccgcgccctcaaatttatc
cgcgatcgcaaagggcaatcgggattgatctatgtgcgtagtcgtcgtgatgcagaaatg
ttagccacttggttacaagaaaactcgtttaaaactgccgcctatcatgcaggcttgcca
ccccaagagcgtcggcatatcgagcagcaatggctgactaatcaatatccctttgtaatc
tgcacttcagcatttgggctaggcattaacaaaccagacacccgttgggtcttacatttt
catccgcctttaacactttcagaatatatccaagaaattggacgggcaggacgcgatggc
aaacctgcggaggcattgatgttagttagtgaaccaacaggattactcgatgatagcgat
cgccaaagggtaaattttttcttacaacagcagcaaaaaatccaacaacaagctctcgcc
cttttgcccaagctcccgaaacaagggaatttcgcggaagttgccaaattacatcccgat
gctgcgatcgctctggggctgttgcatcgggcagggcatctcacatggaaaacacctttt
atttatgaaattcatagcttacataaccagcaacaaaaactaaaacaacaaatgggggat
caaagcaaaattgctcaaatgcaagcttatagctgcgtaaaaggcaatcgctgggctttt
ttacttgataactttggttttgaggaagaatccaagttactgctaaaatctagaagctaa
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