Pseudanabaena galeata: OA858_21835
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Entry
OA858_21835 CDS
T09044
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
pgx
Pseudanabaena galeata
Brite
KEGG Orthology (KO) [BR:
pgx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgx03021
]
OA858_21835
Transcription machinery [BR:
pgx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OA858_21835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
KORA
HTH_38
HTH_Crp_2
HTH_3
HTH_50
HTH_17
Trp_repressor
Sigma70_ECF
SpoIIID
HTH_10
HTH_Tnp_ISL3
HTH_24
HNF-1_N
HTH_23
LacI
HTH_8
HTH_37
Cro
HTH_11
Motif
Other DBs
NCBI-ProteinID:
WGS72320
LinkDB
All DBs
Position
complement(4780450..4781286)
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AA seq
278 aa
AA seq
DB search
MTTATLTIQSDIPTQSSITTHKVREFSSADKTTTLELLKQYRKAPSAYLRDRIVRLNIGL
VKKEVHFWADRHSELYDDLLQVGALGLIGAVDRFELNRGYAFSSFAVRYIRGEIQHYLRD
KNSSVRIPRRWMDLQQQSVRVMQKLRNTLQREPSAKEVANALGVTLSEWQEAKLACQNRA
PLSLDAPIRSEEDDSSSIGDLVADPRSNMQLQQEEKFRLQQALSLLEQRTREIVEFVFIE
DLPQREVAKMLGVSAVTISRQLKKGLSTLRCALEAEAC
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccgcaacactcaccattcagtccgatattcctactcaatcgagcatcactact
cataaagtacgtgagttttcatctgcggacaaaaccactaccctcgaactgctcaagcaa
tatcgcaaagcaccatcagcatacctacgcgatcgcatcgtgcgcttaaatattggtcta
gtcaaaaaagaagtacatttctgggctgatcggcattcagaactatatgatgatttacta
caagtgggcgcattgggtctaatcggcgcagttgatcgctttgaactaaatcgcggctat
gccttcagctcctttgccgtccgctacattcgcggcgaaatccagcattatctacgggac
aaaaactcatcagtacgcatccctcgccgttggatggatttgcaacagcaatcagtacga
gtaatgcaaaaattgcgtaacactttgcaaagagaaccttccgcaaaggaagttgctaat
gcccttggcgtaaccctcagcgaatggcaagaagcaaaactcgcctgtcaaaatcgcgct
cccttaagccttgatgcaccaatccgttctgaagaagatgattcttcctctatcggtgat
ctggttgccgatcctagaagtaatatgcaactacaacaggaagagaagttccgtttacag
caagctctctctctcttagagcaacgcactagagaaattgttgagtttgtcttcattgaa
gatcttcctcaaagagaagttgccaaaatgttaggagtgagcgcagttacaatctcacgc
caactcaagaaaggtttatcaacattgcgttgtgcattagaggctgaagcctgttaa
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