Pseudanabaena galeata: OA858_22160
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Entry
OA858_22160 CDS
T09044
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
pgx
Pseudanabaena galeata
Brite
KEGG Orthology (KO) [BR:
pgx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pgx03016
]
OA858_22160
Enzymes [BR:
pgx01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
OA858_22160
Transfer RNA biogenesis [BR:
pgx03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
OA858_22160
Prokaryotic type
tRNA splicing ligases
OA858_22160
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
WGS72384
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Position
4860704..4861885
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AA seq
393 aa
AA seq
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MPYQKLNISTPKPVLSWAAHDLGYEETKMAKNVASLPFVFKHVALMPDVHLGKGALVGSV
IATKEAIVPAAVGVDIGCGMAAIKTPFRYEQLEGKLKQIRLEIEAAIPVGFNDNKEVEKP
VLNWQGWREFRELHSGVQHLEGKAMKQMGSLGGGNHFIEVCIDTDNQVWLMLHSGSRNIG
NMLAQRHIDTAKNLARLAENSLPDKDLAYFIAGTAEFAAYWRDLQWAQEYARFNRDVMMA
RFKKIIEKFASGGKPVKPLLTVNCHHNYAEKETHSGEDVYVTRKGAVRARTEDYGIIPGS
MGAKSFIVKGKSNAESYCSCSHGAGRLLSRSKAKDQFTLDDLIQQTQGIECRKDTGIIDE
IPAAYKPIEQVMNQQSDLVEVIATLKQIICVKG
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgccttatcaaaagttaaatatctccacacccaagcctgtgttgtcttgggctgctcat
gatctaggttatgaagaaaccaaaatggcaaaaaatgttgcatccttgcccttcgtgttt
aagcatgtagcgcttatgcctgacgtacatctcggtaagggcgctctcgttggttccgtg
attgccactaaagaagcgatcgtacctgcggcggtaggcgtagacattggctgcggcatg
gcagcaattaaaactccatttcgttatgaacagctagaaggtaagcttaagcaaattcgt
ctagaaattgaagccgcaattcccgtaggctttaatgacaataaagaagttgaaaagcca
gtgctaaattggcaaggatggcgagaattccgcgaattacattcaggagttcaacatctg
gaaggtaaagcgatgaagcaaatgggttctttaggtggaggtaatcacttcatagaggtt
tgcatagatacagataatcaggtgtggctgatgctgcattctggttctcgaaatattggc
aatatgctggctcaaagacatatcgatacagccaaaaatctcgcacggttagcagaaaat
tctttgcctgataaggatcttgcctattttattgcgggtactgctgaattcgcagcttat
tggcgagatttacaatgggcgcaggaatatgcgcgtttcaatcgcgatgtcatgatggcg
agatttaagaagatcatcgagaagtttgctagcggtggtaagcctgtgaagcctttacta
actgtaaactgtcatcataactatgcagaaaaagaaactcattccggagaagatgtctat
gtcacccgcaaaggtgcagtaagggcaagaactgaggactatggtattatccctggctca
atgggagcgaaatcttttattgtcaaaggaaaaagtaatgccgaaagttattgctcctgt
tctcacggggcggggcgattgctatcgcggagtaaagcgaaggatcaattcactttagat
gacctaattcagcaaactcaaggcattgagtgtcgcaaggatacaggcatcattgatgaa
attcctgcggcttataaaccaattgagcaagtgatgaatcagcaatctgatttagtggaa
gttatcgcaactttgaaacaaattatctgtgtcaaaggttga
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