Pseudomonas glycinae: AWU82_00640
Help
Entry
AWU82_00640 CDS
T06994
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
pgy
Pseudomonas glycinae
Pathway
pgy02020
Two-component system
pgy02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pgy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AWU82_00640
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AWU82_00640
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pgy02022
]
AWU82_00640
02035 Bacterial motility proteins [BR:
pgy02035
]
AWU82_00640
Two-component system [BR:
pgy02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
AWU82_00640
Bacterial motility proteins [BR:
pgy02035
]
Flagellar system
Flagellar assembly proteins
Others
AWU82_00640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
AAA_2
MCM
AAA
AAA_3
FleQ
HTH_20
HTH_30
MerR
AAA_19
nSTAND3
HTH_24
HTH_28
Sigma70_r4_2
AAA_22
HTH_11
HTH_23
DUF2249
ATPase
AAA_7
AAA_14
HTH_17
HTH_Mga
Myosin_head
Motif
Other DBs
NCBI-ProteinID:
AMQ87023
LinkDB
All DBs
Position
3684524..3685915
Genome browser
AA seq
463 aa
AA seq
DB search
MGIKVLLVEDDRSLREALADTLLLAGHDYHAVGSAEEALNAVEREAFSLVVSDVNMPGMD
GHQLLGLLRARQPQLPVLLMTAHGAVERAVDAMRQGAADYLVKPFEPKALLDLVARHALG
SLGASDAEGPVAVEPASAQLLDLAARVARSDSTVLISGESGTGKEVLARYIHQQSHRASQ
PFIAINCAAIPDNMLEATLFGHEKGSFTGAIAAQAGKFEQADGGTILLDEISEMPLGLQA
KLLRVLQEREVERVGARKPITLDIRVVATTNRDLAGEVAAGRFREDLYYRLSVFPLAWRP
LRERTADILPLAERLLAKHVNKMKHATAKFSPEAQACLIGYPWPGNVRELDNAVQRALIL
QQGGLIQPQDFCLSGPALFAPLPAVVPAASIIREVEIDADSAGALGDDLRRREFQMIIDT
LRTERGRRKEAAEKLGISPRTLRYKLAQMRDAGMDVEGYLFAT
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgggcatcaaggttctgctggtcgaggatgaccgctcgttgcgcgaagcgctggccgat
acgctgttgctggccggtcacgactatcacgcggtgggttcggccgaagaggcgctgaac
gccgtcgagcgcgaagcgttcagtctggtggtcagtgacgtcaacatgccgggcatggac
ggccatcaattgctcggcctgctgcgcgcacggcaaccgcaattgccggtgctgctgatg
accgcccatggcgcggtcgaacgcgcggtcgatgccatgcgccagggcgcggcggattat
ctggtcaagccgttcgagcccaaggctctgctggatctggtagcgcgtcacgccttgggc
agccttggcgccagcgacgccgaaggcccggtcgcggtcgagccggccagtgctcaattg
ctggatctggcggcgcgggttgcacgcagtgattccaccgtgctgatttccggcgagtcc
ggcaccggcaaggaagtgctggcgcgctacatccaccagcaatcccatcgcgccagtcag
ccgttcattgcgatcaactgtgcggcgatccccgacaacatgctcgaagccaccctgttc
ggtcacgaaaagggctcgttcaccggcgccatcgcggcccaggccggcaagttcgaacag
gcggacggcggcaccattctgctcgatgagatttccgaaatgcccctcggtctgcaagcc
aagctgctgcgggtgttgcaggagcgggaagtcgagcgggtcggcgcacgcaagccgatc
accctcgatattcgcgtggtagccaccaccaaccgtgatctggccggtgaagtggcagcg
gggcgattccgtgaagacctctattatcgtctgtcggtttttcccctggcatggcgtccg
ttgcgcgagcgcaccgccgatatcctgccactggccgagcgtctgttggccaaacacgtc
aataaaatgaagcatgcgacggcgaaattctcgcccgaggcgcaagcgtgcctgatcggt
tatccgtggccgggcaacgtgcgcgagctggataacgcggttcagcgcgccttgattctg
cagcagggcgggttgatccagccgcaggatttctgtctctccgggcctgcgctgtttgcg
ccattgccggcggtggtgcccgccgcgtcgatcattcgagaggtcgaaatcgacgcggat
tcggccggtgcgctgggcgatgacctgcgtcgtcgcgagttccagatgatcatcgacacc
ctgcgtaccgagcgcggtcgacgcaaggaagcagcggaaaaactcggcatcagcccgcgc
accctgcggtacaaactggcgcaaatgcgcgatgcgggcatggatgtcgaaggctacctg
ttcgcaacctga
DBGET
integrated database retrieval system
