Pseudomonas glycinae: AWU82_06725
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Entry
AWU82_06725 CDS
T06994
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pgy
Pseudomonas glycinae
Pathway
pgy03420
Nucleotide excision repair
pgy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pgy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AWU82_06725
03430 Mismatch repair
AWU82_06725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgy03400
]
AWU82_06725
Enzymes [BR:
pgy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AWU82_06725
DNA repair and recombination proteins [BR:
pgy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AWU82_06725
MMR (mismatch excision repair)
Other MMR factors
AWU82_06725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AMQ83001
LinkDB
All DBs
Position
complement(4772738..4774921)
Genome browser
AA seq
727 aa
AA seq
DB search
MRDDLSLLLNSLNDAQRQAVAAPVGRQLVLAGAGSGKTRVLVHRIAWLIQVENASPHSIL
SVTFTNKAAAEMRHRIEQLLGINPAGMWVGTFHGLAHRLLRAHWQEAGLSQTFQILDSDD
QQRLVKRVIRELGLDEQRWPARQAQWFINGQKDEGLRPQHIQASGDLFLATMRGIYEAYE
AACQRAGVIDFSELLLRALDLWRDHPGLLAHYQKRFRHILVDEFQDTNAVQYAWLRLLGK
GGDSLMVVGDDDQSIYGWRGAKIENIHQYSSDFPDSVTIRLEQNYRSTAGILKAANALIA
NNTGRLGKELWTDGGDGEAINLYAAFNEHDEARYVVETIESALKTGLARSDIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLLEGRGNDAALERVINVPARGI
GEKTVEAIRDHARHSDVSMWEAMRQLVANKGLTGRAAGALGAFIELIENLAAKCAEMPLH
LMTQTVIEQSGLIAYHEAEKGEKGQARVENLEELVSAARNFENTEEDEELTPLAAFLGHA
SLEAGDTQADEHEDSIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQNLVMTYAETRRLYGSETYNKVSRFVREVPKGLIQEVRLSNSVSRPFGGNQ
SMGGSNLFSGSEIPETGLSLGQAVRHSIFGDGVILNFEGAGAQARVQVNFAEGSKWLMLG
YAKLEAI
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgatctctcccttctgctgaactccctcaacgatgcccaacgccaggccgta
gcggcccccgttggccgtcaattggtcctggccggtgccggctccggcaaaacccgagtg
ctggtgcaccgtatcgcctggttgatccaggtcgaaaacgcctcgccccactcgattctg
tcggtgaccttcaccaataaggccgctgccgagatgcgtcaccgcatcgagcaattgctg
ggcatcaacccggccggcatgtgggtcggcaccttccacggcctggcgcaccgtctgttg
cgggcgcactggcaggaagccgggctgagccagacctttcagattctcgacagcgacgac
cagcaacgcctggtcaagcgggtgatccgcgagctggggctggacgagcaacgctggccg
gcccgtcaggcacagtggttcatcaacgggcagaaagacgaaggtctgcgtccgcaacac
attcaggccagcggcgatctgttcctggccaccatgcgcggcatttatgaagcgtacgag
gcggcgtgccagcgtgccggcgtcattgatttctccgaactgctgctgcgcgccctcgac
ctgtggcgcgaccacccgggcctgctggcgcactaccagaagcgtttccgacatattctg
gtggacgaattccaggacaccaacgccgtgcagtacgcgtggttgcgtctgctgggcaaa
ggcggcgacagcctgatggtggtcggcgacgacgaccagtcgatctacggctggcgcggc
gcgaaaatcgagaacatccaccagtattcttcggacttcccggattcggtgaccatccgt
ctggagcagaactaccgctccacggccggcatcctcaaggccgccaacgccctgatcgcc
aacaacaccgggcgtctgggcaaagagctgtggaccgatggcggcgatggcgaagcgatc
aatctttacgccgccttcaacgaacacgatgaagctcgctacgttgtcgaaaccatcgaa
agcgcgctgaaaaccggcctggctcgcagcgatatcgcgattctctaccgctccaacgcc
caatcgcgcgttctggaagaagccttgctgcgtgaacgcattccgtaccgcatctatggc
ggccagcgcttcttcgagcgggcggaaatcaagaacgccatggcttacctgcgcttgctg
gaaggtcgcggcaacgatgcggccctggaacgggtgatcaacgttccggcgcgcggcatc
ggcgagaaaactgtcgaagcgattcgcgaccatgcgcgccacagcgatgtgtcgatgtgg
gaagccatgcgccagctggtggccaacaaaggcctgaccggtcgcgccgccggtgcgctg
ggcgcgtttatcgaactgatcgaaaacctggctgccaagtgcgccgagatgccgttgcac
ctgatgacccagaccgtcatcgagcaatccggactgatcgcctaccacgaagcggaaaaa
ggcgagaaaggccaggcccgggtggaaaaccttgaggaactggtcagcgctgcgcgcaac
ttcgagaacaccgaagaagacgaagagctgacgccactggcggcatttctcggccacgct
tcactggaggccggtgacacccaggccgacgaacacgaagacagcattcagttgatgacc
ctgcacagcgccaagggcctggaattcccttacgtgttcctggtgggcatggaagaaggc
ctgttcccgcacaagatgagcctggaagaaccgggccgccttgaggaagagcggcgtctg
gcctatgtcggcattacccgggcgatgcagaatctggtgatgacctatgctgaaacccga
cgcctgtacggcagcgaaacctacaacaaggtgtcgcgtttcgtacgggaagtaccgaaa
ggcctgattcaggaagtacgcctgtccaacagcgtcagccggccgttcggcggcaaccag
tcgatgggcggcagcaacctgttcagcggcagcgagataccggaaaccggcctgagcctc
gggcaggctgtccgtcactcgatcttcggcgacggcgtgatcctaaacttcgaaggcgcc
ggcgcccaggcccgggtgcaggtgaatttcgccgaaggcagcaagtggctgatgctcggg
tacgcgaagctggaagccatttaa
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