Pseudomonas glycinae: AWU82_07040
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Entry
AWU82_07040 CDS
T06994
Symbol
clpV
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
pgy
Pseudomonas glycinae
Pathway
pgy02025
Biofilm formation - Pseudomonas aeruginosa
pgy03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pgy00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
AWU82_07040 (clpV)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
AWU82_07040 (clpV)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pgy02044
]
AWU82_07040 (clpV)
Secretion system [BR:
pgy02044
]
Type VI secretion system
Imp/Vas secretion system core components
AWU82_07040 (clpV)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
AAA_5
ClpB_D2-small
AAA_22
NBD_SMAX1
Clp_N
AAA_16
NACHT
AAA_7
TniB
nSTAND3
Sigma54_activat
AAA_29
Hpr_kinase_C
AAA_25
SLFN-g3_helicase
GAS
CorA
Motif
Other DBs
NCBI-ProteinID:
AMQ83063
UniProt:
A0ABM5ZJB7
LinkDB
All DBs
Position
4844747..4847404
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AA seq
885 aa
AA seq
DB search
MINVDLQQLIQALDAETRRDLERSAERCVARGGSKILVEDLLLGLLERPNGLLSRALQDA
DVDAGELSAALQSRVEHSASRNPVFAPELVQWLQDALLVANLELGQTSVEDAALILALLR
NPMRYAGSRYQPLLAKLNIDRLKEFALSQQPQAAANGKPAAQGESLLERFTHNLTQQARD
GKLDPVLCRDGAIRQMVDILARRRKNNPIVVGEAGVGKTAIVEGLASRIAAGEVPQVLKG
VELLSLDMGLLQAGASVKGEFERRLKGVIDEVKASPKPIILFIDEAHTLIGAGGNAGGSD
AANLLKPALARGELRTIAATTWAEYKKYFEKDPALARRFQPVQLHEPTVSEAVTILRGLA
QVYEKSHGIYLRDDAVVSAAELSARYLAGRQLPDKAVDVLDTACARVRISLAAAPESLER
LRGELAEGGRQRQALRRDAEAGLLIDHEALEALEARLDEAEAEMVALETQWTEQKQLAER
LLELRQQLAKAREAAAVEPVVTVEEDAEGTVIETHAAEVDEALSVEALEAQLNETHSALT
AAQVKERLVSFEVCPRLVAEVISAWTGVPLAQLAREHNAKVASFATDLRTRIRGQEQAVH
ALDRSMRATAAGLNKPDAPVGVFLLVGPSGVGKTETALALADLLYGGDRFITTINMSEFQ
EKHTVSRLIGAPPGYVGYGEGGMLTEAVRQKPYSVVLLDEVEKADPDVLNLFYQIFDKGV
ANDGEGREIDFRNTLILMTSNLGSDKISDLCEDGARPTAEVLEETIRPVLSKHFKPALLA
RMKVVPYYPVGGPVLRELIEIKLGRLGERLNRRQLDFTWCQNLVDHLSERCTQSESGARL
IDHLLDQHVLPLVADRLLDAMATGESLKRVHATLDGEASVTCEFA
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacgtagacctgcaacaactcatccaggcgctggacgccgaaacccgtcgcgat
ctggagcgttcggccgagcgctgcgtggcccgtggcggcagcaagattctggtcgaagac
ttgctgctcggcctgctggagcgcccgaacggtttgctctcgcgggcactgcaggatgcc
gacgttgatgccggcgaactgagcgccgccctgcaatcgcgggtcgagcacagcgcttcg
cgcaacccggtgttcgctccggaactggtgcagtggctgcaagacgcgctgctggtggcc
aaccttgagctgggccagacctcggtcgaagacgcggcgctgatcctcgcgctgctgcgc
aacccgatgcgctacgccggcagccgctaccagccgttgctggccaaactgaacattgat
cgcctgaaggaatttgccctgtcgcaacagcctcaggcagcggccaacggtaagccggcc
gcccagggcgaatcgctgctggagcgcttcacccataacctgacccaacaggcccgcgac
ggcaaactcgacccggtgctgtgccgcgatggcgcgatccgccagatggtcgacatcctt
gcccgtcgccgcaagaacaacccgatcgtggtcggtgaggccggtgtcggtaaaaccgcc
atcgtcgaaggcctggcctcgcgcatcgctgccggtgaagtgccgcaagtgctcaagggt
gtcgagctgctgtcgctggacatgggcctgttgcaggccggtgccagcgtcaaaggtgaa
ttcgagcgtcgtctgaaaggcgtgatcgacgaggtcaaagcctcgccgaagccgatcatc
ctgttcatcgacgaagcccacaccctgatcggcgcgggcggcaatgccggcggttccgat
gcggccaacctgctgaagccggcactggcgcgcggcgaactgcgcaccatcgccgcgacc
acctgggccgagtacaagaaatacttcgagaaagacccggcgctggcccgtcgtttccag
ccggttcaactgcacgaaccgaccgtgagcgaagccgtcaccatcctgcgtggcctggct
caggtctacgagaaaagtcatggcatctatctgcgcgatgacgcggtggtgtccgccgct
gagttgtccgcccgctatctggccggtcgccagctgccggacaaagccgtcgacgttctc
gacaccgcgtgcgcccgcgtgcgcatcagcctcgctgctgccccggaaagcctggaacgc
ctgcgtggcgaactggctgaaggcggtcgtcagcgtcaggccctgcgccgcgatgccgaa
gccggtctgctgatcgaccacgaagcgctggaggcactggaagcgcgcctggacgaagcc
gaagccgaaatggtcgcactggaaacccagtggaccgagcaaaaacaactggccgagcgc
ctgctggaactgcgccagcaactggccaaggcccgtgaagccgctgcggtcgagccggtg
gtgaccgttgaagaagacgccgaaggcaccgtgatcgaaacccacgccgccgaagttgac
gaagctcttagcgtcgaagcgctggaagcgcaactcaacgaaacccacagcgccctgacc
gccgctcaggtcaaggagcgtctggtcagcttcgaagtctgcccgcgtctggtggccgaa
gtgatcagcgcctggaccggcgtgccgctggcgcaactggcccgcgagcacaacgccaag
gtcgccagcttcgccaccgacctgcgcacccgcatccggggtcaggaacaagccgtgcac
gccctggatcgctcgatgcgcgccaccgctgccggcctgaacaagcctgacgcaccggtc
ggcgtgttcctgctggtcggcccgagcggcgtcggcaagaccgaaaccgcactggcactt
gccgacctgctgtacggcggcgaccgtttcatcaccaccatcaacatgtccgagttccag
gagaagcacaccgtttcccgcctgatcggtgcaccgccaggttacgtcggttacggcgag
ggcggcatgctcaccgaggccgtgcgccagaagccgtactcggtggtgctgctcgatgaa
gtcgagaaggccgacccggacgtgctcaacctgttctaccaaatcttcgacaaaggcgtg
gccaacgacggcgaagggcgcgagatcgacttccgtaatacgttgatcctgatgacctcg
aacctgggcagcgacaagatcagcgacctctgcgaagacggcgcgcgtccgactgccgaa
gtgctggaagaaaccattcgcccggtgctcagcaaacacttcaaaccggcgctgctggcg
cggatgaaagtggtgccgtactacccggtcggcggcccggtgctgcgcgagctgatcgag
atcaagctcggtcgcttgggcgagcgtctgaaccgtcgccagctggatttcacctggtgc
cagaacctcgtcgatcacctgtccgagcgctgcacccaaagcgaaagcggtgcacgcctg
atcgaccacttgctcgaccagcacgtgctgccgctggtggccgaccgcttgctcgacgcc
atggccaccggtgaaagcctcaagcgcgtgcatgcgacgctcgacggtgaagccagcgtg
acctgcgagttcgcctga
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