KEGG   Pseudomonas glycinae: AWU82_08955
Entry
AWU82_08955       CDS       T06994                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pgy  Pseudomonas glycinae
Pathway
pgy03030  DNA replication
pgy03430  Mismatch repair
pgy03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pgy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AWU82_08955
   03430 Mismatch repair
    AWU82_08955
   03440 Homologous recombination
    AWU82_08955
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pgy03032]
    AWU82_08955
   03400 DNA repair and recombination proteins [BR:pgy03400]
    AWU82_08955
Enzymes [BR:pgy01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AWU82_08955
DNA replication proteins [BR:pgy03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     AWU82_08955
DNA repair and recombination proteins [BR:pgy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     AWU82_08955
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2
Other DBs
NCBI-ProteinID: AMQ83431
UniProt: A0ABM5ZIC5
LinkDB
Position
complement(2951006..2951713)
AA seq 235 aa
MSLFSWLRPASPVVPDDLQQRLTKLPAIGELRECSLREQRWVVLDLETTGLNLSKDRVLS
IGAVVIEDGAIDFSQQFERTLQCHELKLGPSVLIHGLAPSAIAAGSEPTEALVELLEFIG
DSPVLAFHASFDQHMLGRALKEHLGHKLQTVFLDVAQIAPLVCPQAHIREAGLDEWIDWF
KLEVFERHHASADALATAELALILFSRARQQQIHSPLNLQQRLSQWKRRQQTHSF
NT seq 708 nt   +upstreamnt  +downstreamnt
atgagcctgttctcgtggctgcgtccggccagccccgttgtgccggacgacctgcaacag
cgcctgacgaaactgccggccatcggcgaactgcgcgagtgcagcctgcgcgagcaacgc
tgggtagtgctggatctggaaaccaccgggctgaacctgagcaaggatcgggtgctgtcg
atcggcgcggtggtgatcgaggacggtgcgatcgacttcagtcagcaattcgaacgcacc
ctgcaatgtcacgagttgaaactcggcccgagcgtgttgattcacggcttggcaccgagc
gcgattgccgccggcagcgagcccaccgaagctttggtcgagttgctggagtttatcggc
gacagcccggtgctggcgtttcacgcttcgttcgaccagcacatgctcggccgcgcactg
aaggaacatctcgggcacaagttgcagacggtgtttctcgatgtggcgcagatcgccccg
ctggtttgcccgcaggcacatattcgcgaggcggggctggacgagtggatcgactggttc
aagctcgaagtgttcgagcgccaccatgcgagcgccgatgctctggccaccgcggaactg
gcgctgatcctgttcagtcgggcgcgccagcagcagatccacagtccgctgaatctgcag
caacgcctgagtcagtggaagcgccgccagcagacgcattcgttctga

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