Pseudomonas glycinae: AWU82_08955
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Entry
AWU82_08955 CDS
T06994
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pgy
Pseudomonas glycinae
Pathway
pgy03030
DNA replication
pgy03430
Mismatch repair
pgy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pgy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AWU82_08955
03430 Mismatch repair
AWU82_08955
03440 Homologous recombination
AWU82_08955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgy03032
]
AWU82_08955
03400 DNA repair and recombination proteins [BR:
pgy03400
]
AWU82_08955
Enzymes [BR:
pgy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AWU82_08955
DNA replication proteins [BR:
pgy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AWU82_08955
DNA repair and recombination proteins [BR:
pgy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AWU82_08955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AMQ83431
UniProt:
A0ABM5ZIC5
LinkDB
All DBs
Position
complement(2951006..2951713)
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AA seq
235 aa
AA seq
DB search
MSLFSWLRPASPVVPDDLQQRLTKLPAIGELRECSLREQRWVVLDLETTGLNLSKDRVLS
IGAVVIEDGAIDFSQQFERTLQCHELKLGPSVLIHGLAPSAIAAGSEPTEALVELLEFIG
DSPVLAFHASFDQHMLGRALKEHLGHKLQTVFLDVAQIAPLVCPQAHIREAGLDEWIDWF
KLEVFERHHASADALATAELALILFSRARQQQIHSPLNLQQRLSQWKRRQQTHSF
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgttctcgtggctgcgtccggccagccccgttgtgccggacgacctgcaacag
cgcctgacgaaactgccggccatcggcgaactgcgcgagtgcagcctgcgcgagcaacgc
tgggtagtgctggatctggaaaccaccgggctgaacctgagcaaggatcgggtgctgtcg
atcggcgcggtggtgatcgaggacggtgcgatcgacttcagtcagcaattcgaacgcacc
ctgcaatgtcacgagttgaaactcggcccgagcgtgttgattcacggcttggcaccgagc
gcgattgccgccggcagcgagcccaccgaagctttggtcgagttgctggagtttatcggc
gacagcccggtgctggcgtttcacgcttcgttcgaccagcacatgctcggccgcgcactg
aaggaacatctcgggcacaagttgcagacggtgtttctcgatgtggcgcagatcgccccg
ctggtttgcccgcaggcacatattcgcgaggcggggctggacgagtggatcgactggttc
aagctcgaagtgttcgagcgccaccatgcgagcgccgatgctctggccaccgcggaactg
gcgctgatcctgttcagtcgggcgcgccagcagcagatccacagtccgctgaatctgcag
caacgcctgagtcagtggaagcgccgccagcagacgcattcgttctga
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