Pseudomonas glycinae: AWU82_09415
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Entry
AWU82_09415 CDS
T06994
Name
(GenBank) chromosome segregation protein SMC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pgy
Pseudomonas glycinae
Brite
KEGG Orthology (KO) [BR:
pgy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgy03400
]
AWU82_09415
DNA repair and recombination proteins [BR:
pgy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AWU82_09415
Archaeal homologous recombinant proteins
AWU82_09415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_21
SMC_N
ABC_tran
MMR_HSR1
nSTAND3
AAA_15
RsgA_GTPase
AAA_22
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AMQ83520
LinkDB
All DBs
Position
complement(2240134..2243775)
Genome browser
AA seq
1213 aa
AA seq
DB search
MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR
LNNTGRDAKVPDADGEIATGDPRTLLRRGTGEGFAEVDFVGVDGRRYRARWEANRAREKA
GGKLQASRQSLRDIDQDQLLASQKGEYKTQLEAALGLNFEQFTRAVLLAQSEFSAFLKAD
DNDRSELLEKLTDTALYTRLGRRAFDKTKEAREAHKQLQDQAIGVTPLAPEARAELDERF
NAAQQQLKLQQAQLKQIEQQHDWLKELLRLQDSQLAAAEQLRSAEHERESLAGERLKLTR
LEQLAPQRHQFARKTELDALLTPLAEQISAHTRQESELTERQTRLEQDLAAAQIALTQAQ
TQLSESAPLLRQAFEEQSTLARLAKDVASGAEAKHAAEQACTQGQSTIQSLLDQQKQVAE
RLQRIAADLEQSAHLAPLSEAWNAYRDRLQQLMLIGNRLNKGESELASLEENATRASEAL
ATQKQQLEVLFKEAGAEPDAVAEQIGILGNLLQDNRKQLRAVEDLTRLWASQQELDKRSA
ELQQRQLDAQQERERLTQDGVKTKSELTVAEQTLNVTRELLERQRLARSASVEELRAQLQ
DDQPCPVCGSNEHPYHQPEALLQSLGRHDESEQASAQQAVDQLKEKLTELRADVGGVIAR
QKELLQQQEQLAAQQLALTPSIEAHPLATSLLNQDSDKRATWLTRQNEQLNQSITQDEQR
QTALLTLQQDAARLTQQLRQAETAHQQATQHLSNQQRELSADRQRLDEELAAFATLLPSD
TLDALRAEPAATFMQLDRQIAERLAQVDQQKEELAEQQQRQQTLEKEQDRQQGRVQQLQN
AKQQLNALTGQQQASQEKLAQLLGDHSCAEHWQQQLEQAVEQARNAESTTTQALQDARTQ
LVQIAAELKAQQERLQALETEDRDLAGKIADWRARHPELDDGGLEELLRIDDAQVDELRQ
RLQHNEKAVEQAKVLLQERDQRLLEHQAQHNGNLDAEQLASALADLQNQCTASEQQCAEL
RAEQAEDQRRQNANQALAQQIADAYAEYQRWARLNALIGSATGDTFRKIAQAYNLDLLVH
HANVQLRQLVKRYRLKRGGSMLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLKIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQV
QRQGNGLSTLEVK
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgaagattctcgccattcgcttgaaaaacctcgcgtcgctggccggcccgttcgagatc
gacttcaccgccgaaccgctggccagcgccggtctgttcgcgatcaccggccccaccggc
gccggtaaaagcactctgctcgatgccttgtgcctggcgctgttcggcgccgtgccacgc
ctgaacaacaccgggcgtgacgccaaggtgccggacgccgacggcgaaatcgccaccggt
gacccgcgcaccctgctgcgtcgcggcaccggtgaaggctttgccgaagtggattttgtc
ggcgtcgatggccgccgctatcgtgcgcgctgggaagccaaccgcgcccgggaaaaggcc
ggcggcaagttgcaggccagccgtcagagcctgcgcgacatcgatcaggatcaactgctc
gccagtcagaaaggcgagtacaagactcagctcgaagccgcactgggcctgaacttcgaa
cagttcacccgcgccgtgctgctggcccagagcgagttcagtgccttcctcaaggccgac
gacaacgaccgcagcgaactgctggaaaagctcaccgacaccgcgctctacacccgcctc
ggccgccgcgcgttcgacaagaccaaagaggcccgcgaagcccacaagcagttgcaggat
caggccatcggcgtgactccgctggcccctgaagcccgcgccgaactcgacgaacgcttc
aatgccgcccaacaacaattgaagttgcagcaagcgcagctcaagcagatcgagcaacag
cacgactggctaaaagagctgctacgactgcaagactcccaactagccgccgccgagcaa
ctgcgcagcgccgagcatgagcgagagtcgctggccggtgagcgtttgaagctcacccgc
ctggaacaactcgcgccgcaacggcaccagttcgcccgcaaaaccgaactggatgcactg
ctgacgccactggcggaacagatcagcgcgcacacccggcaagaaagcgaactgaccgag
cgccagacgcgactggaacaggatctcgccgccgcgcagatcgccctgacccaggcgcaa
acgcagttgagcgaaagcgccccactattgcgccaggctttcgaggagcaaagcaccctc
gcccgcctcgccaaggacgttgcgtccggcgccgaagcgaagcacgccgcagagcaggcc
tgcacccagggccaaagcacaatccagtccctgctcgatcagcaaaaacaagtcgctgaa
cgtttgcaacgtatcgccgccgatcttgagcaaagcgctcatctggcaccgttgagcgaa
gcgtggaatgcctatcgcgaccgcttgcagcaactgatgctgatcggcaatcggttgaac
aagggcgaaagcgaactcgcttccctcgaagaaaacgccacccgcgccagcgaagcgctc
gccacgcagaagcagcagctggaagtgctgttcaaagaggccggtgccgaaccggacgcc
gtcgccgaacagatcggcatcctcggcaatctgttgcaggacaaccgcaagcaattgcgc
gccgtcgaggacctgacgcgcctgtgggccagtcagcaggagctggacaagcgcagtgcc
gaactgcaacagcgtcagctcgatgcgcaacaggaacgcgagcgcctgactcaggacggg
gtgaaaaccaagtccgagctgaccgtcgccgaacagaccctcaacgtcacccgcgaactg
ctcgaacgccagcgtctggcccgcagtgccagtgtcgaagagttgcgcgcgcagttgcag
gacgaccagccgtgcccagtgtgcggcagcaacgagcacccgtatcatcagccggaagcc
ctgctgcaaagcctcggccgtcacgatgaaagcgagcaggccagcgcgcagcaagccgtc
gatcaactgaaggaaaaactcaccgagctgcgcgccgatgtcggtggggtgattgctcgg
caaaaggaactgctgcaacagcaggaacaactggccgcccagcagctggcgctgacgccg
agcatcgaggcacatccgctcgcgacatcgttgctgaatcaggacagtgacaagcgcgcc
acgtggctgacccgccagaacgaacaactgaatcagagcattacccaggacgaacagcgc
cagaccgccctgctcacgctgcaacaggatgcggcgcgcctgacccagcaattgcgtcag
gccgagaccgcacaccagcaagcgactcagcacctgagcaatcagcaacgcgagctgagc
gctgaccgccagcgcctggacgaagaactggcggccttcgccacactgctgccgagcgac
accctcgatgccttgcgcgctgaaccggctgcgaccttcatgcagcttgaccggcagatc
gccgaacgcctggcgcaagtcgatcagcagaaggaagagctggccgaacagcaacagcgc
cagcagacgctcgagaaagaacaggaccgccaacagggccgtgtgcagcagctgcaaaac
gctaagcagcaactcaacgcgctgaccgggcaacaacaggccagtcaggaaaaactggcg
caattgttgggagatcacagctgcgccgagcattggcagcagcaactggaacaggccgtg
gagcaggcgcgcaacgccgaatccacgacgactcaggcgctgcaggacgcgcgtacgcag
ctcgtgcaaatcgccgccgaactgaaagcgcagcaagagcgtctgcaagcgctggaaacc
gaagaccgcgatctggccggcaagattgccgactggcgtgcgcgccatccggaactggat
gacggtggcctcgaagagctgctgcggatcgatgacgcgcaggtcgacgaactgcgccag
cgcttgcagcacaacgaaaaagccgttgaacaggccaaggtgttgttgcaggaacgcgat
cagcgtctgctcgaacatcaggcccagcacaacggcaatctggatgccgaacagctcgcc
agcgccctcgccgacctgcaaaaccagtgcacggccagcgaacagcaatgtgccgaactg
cgcgccgagcaggccgaagaccagcggcgccagaacgccaatcaggcgctggcgcagcag
atcgccgatgcctatgccgagtatcagcgctgggcgcggctcaatgcgctgatcggctcg
gccaccggcgacaccttccgcaagatcgcccaagcctacaacctcgacttgctggtgcat
cacgccaacgtacagctgcggcaactggtcaagcgctatcgcctcaagcgcggcggcagc
atgctcggcctgctggtgatggacaccgaaatgggcgacgaactgcgctcggtgcattcg
ctgtccggcggcgaaaccttcctggtctcgctggccctcgccctgggcctggcctcgatg
gcgtcgagcacgctgaagatcgaatcgctgttcatcgacgaaggtttcggcagcctcgat
ccggaatccctgcaactggccatggacgccctcgacggcttgcaggcgcagggccgcaag
gtcgcggtgatttcccacgtgcaggaaatgcacgagcggattccggtgcagattcaggta
cagcgccagggcaacggtctgagcacactggaggtgaaatga
DBGET
integrated database retrieval system
