Pseudomonas glycinae: AWU82_12020
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Entry
AWU82_12020 CDS
T06994
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pgy
Pseudomonas glycinae
Pathway
pgy00071
Fatty acid degradation
pgy00280
Valine, leucine and isoleucine degradation
pgy00310
Lysine degradation
pgy00362
Benzoate degradation
pgy00380
Tryptophan metabolism
pgy00410
beta-Alanine metabolism
pgy00640
Propanoate metabolism
pgy00650
Butanoate metabolism
pgy00907
Pinene, camphor and geraniol degradation
pgy00930
Caprolactam degradation
pgy01100
Metabolic pathways
pgy01110
Biosynthesis of secondary metabolites
pgy01120
Microbial metabolism in diverse environments
pgy01200
Carbon metabolism
pgy01212
Fatty acid metabolism
Module
pgy_M00087
beta-Oxidation
pgy_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pgy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
AWU82_12020 (fadB)
00650 Butanoate metabolism
AWU82_12020 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
AWU82_12020 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
AWU82_12020 (fadB)
00310 Lysine degradation
AWU82_12020 (fadB)
00380 Tryptophan metabolism
AWU82_12020 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
AWU82_12020 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
AWU82_12020 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
AWU82_12020 (fadB)
00930 Caprolactam degradation
AWU82_12020 (fadB)
Enzymes [BR:
pgy01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
AWU82_12020 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
AWU82_12020 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
AWU82_12020 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
AWU82_12020 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
AMQ84007
LinkDB
All DBs
Position
3088047..3090194
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDTIKADASIKGVIVSS
GKDVFIVGADITEFVDNFKLPDAELVAGNLEANKIFSDFEDLNVPTVAAINGIALGGGLE
MCLAADYRVMSTKAKIGLPEVKLGIYPGFGGTVRLPRLIGADNAIEWIAAGKENRPEDAL
KVGAVDAVVAPEKLQDAALELIKRAVSGEFDYKAKRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIGLFLNDQEL
KKKAKAYDEIAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEAQVK
EDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSELAIATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKIMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDVLYEAKRLGQKNGKGFYAYEADKKGKQ
KKVADPSVLEVLKPIVYEQREVTDEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGALYHPTAKLREMAKNGQSFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaagctcttgaaagtggcatcgtcgaattg
aaattcgacctcaagggtgagtccgtcaacaagttcaaccgtcttaccctgaacgagctg
cgtcaggccgtagacaccatcaaggcagatgcttcgatcaagggcgtgatcgtcagcagt
ggcaaggacgtgttcatcgtcggcgccgacatcaccgaatttgtcgacaacttcaagctg
ccggatgccgagctggttgctggcaatctcgaagccaacaagatcttcagcgatttcgaa
gacctcaacgttccgaccgtcgccgcgatcaatggcattgctctgggtggcggtctggaa
atgtgcctggcagcggactaccgcgtcatgtccaccaaggccaagatcggtctgccggaa
gtcaagctgggcatctacccgggcttcggtggtaccgtgcgtctgccgcgtctgatcggt
gccgacaacgccatcgagtggattgccgccggcaaggaaaaccgtcctgaagacgcgctg
aaagtcggcgccgtcgatgccgtggttgctcccgaaaagctgcaggatgccgcccttgag
ctgatcaagcgcgccgtctccggcgagttcgattacaaggccaagcgtcagcctaagctg
gaaaagctcaagctgaacgccattgaacaaatgatggctttcgaaaccgccaaaggtttc
gtggctggccaggccggtccgaactacccggccccggtcgaagcgatcaagaccatccag
aaagccgcgaacttcggtcgcgacaaggcgctggaagtcgaagctgcaggtttcgtgaaa
ctggccaagacctctgccgcgcagagcttgatcggtctgttcctgaacgatcaggaactg
aagaaaaaggccaaggcctacgacgaaatcgccaaggacgtgaagcaggctgccgtactg
ggcgccggcatcatgggtggcggtatcgcctatcagtcggcttccaaaggtacgccgatc
ctgatgaaggacatcaacgagcacggcatcgagcaaggtctggcggaagccgccaagctg
ctggtcggtcgcgttgataaaggccgcatgactgccgcgaagatggctgaagtgctcaac
ggcattcgtcctacgctgtcctacggcgatttcggtcacgtcgacctggtcgttgaggcc
gtggtcgagaacccgaaggtcaaacaagccgttctggcggaagtcgaagctcaagtcaaa
gaggacaccatcctcgcgtccaacacttcgaccatttccatcagcctgctggccaaggcc
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtgattcgtggcgagaagtccagcgagctggccatcgccaccaccgttgcc
tacgccaagaaaatgggcaagaacccgatcgtcgtcaacgactgcccgggcttcctggtc
aaccgcgtcctgttcccgtacttcggcggtttcgccaaactggtcagcgccggtgtggac
ttcgtccgtatcgacaagatcatggaaaaattcggctggccgatgggcccggcatacctg
atggacgtggtcggcatcgacaccggtcaccacggtcgtgacgtaatggctgaaggcttc
ccggaccgcatgaaggacgaccgtcgttcggccatcgacgtgctttacgaagccaaacgt
ctgggtcagaagaacggcaagggcttctacgcctacgaggctgacaagaaaggcaagcag
aagaaagtcgccgacccgtcggtactggaagtgctcaagccgatcgtctacgagcagcgc
gaagtcactgacgaagacatcatcaactggatgatgatcccgctgtgcctggaaaccgtg
cgttgcctggaagacggcatcgtcgaaaccgccgccgaagccgacatgggtctggtctac
ggtattggtttccctccattccgtggcggtgcgctgcgctacatcgattcgatcggtgtt
gccgagttcgttgccctggccgaccagtacgctgatttgggcgcgctgtaccacccgacc
gcgaagctgcgcgaaatggccaagaacggccagagcttcttcggttaa
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