Pseudomonas glycinae: AWU82_12135
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Entry
AWU82_12135 CDS
T06994
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pgy
Pseudomonas glycinae
Pathway
pgy00550
Peptidoglycan biosynthesis
pgy01100
Metabolic pathways
pgy01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pgy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AWU82_12135 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AWU82_12135 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pgy01011
]
AWU82_12135 (mrdA)
Enzymes [BR:
pgy01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
AWU82_12135 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
pgy01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
AWU82_12135 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AMQ84029
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All DBs
Position
3059626..3061518
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AA seq
630 aa
AA seq
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MPEPIPIKDHEKETRLVNKRLIACALFVFAISCALVVRLYILQVVEFDYHSTISENNRVH
VLPIPPTRGLIYDRNGVLLADNRPSYNLTITRERATDVNQELDEVINLLHLPAEDRAVFD
KAMKQSRHPFTPVTLFYELTEEQIAVLAVNEFRLPGLDVEPQFVRNYPLGAHFAHSIGYV
GRINEKESKTLDSVEYRGTQSIGKTGIERFYEPQLHGHVGYEEVETNAQGRVLRVLKHTD
PIPGKNIVLSLDVKLQEAAEAALGDRRGSVVALDPSTGEVLAMVSNPSFDPNLFVTGISS
KEYSALRDSIDRPLFNRVLRGLYAPGSTIKPEVAIAGLDTGVVTPQTRVFDPGYYQLPDF
DHKYRNWNHSGDGWVDMDAAIMRSNDTYFYDLAHKLGIDRLHDYMAMFGLGEKVSLDMFE
ESPGLMPSQAWKRATRRQAWFPGETVILGIGQGYMQVTPLQLAQATALIANKGVWNRPHL
AKTVDGVAPVDEHPMPNILLKDPRDWEQVNHGMQMVMHDARGIARAAAAGAQYRIAGKSG
TAQVVAIKQGERYNREKTLERHRDNALFVGFAPAEHPKIAISVMIENGEAGGRVAGPVVR
QIMDAWLLDQDGHLKPQYAAPTKAPGDPHV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacccatccctatcaaggaccacgaaaaagagacgcggctggtcaacaaacgc
ctgatcgcctgtgccttgttcgtcttcgccatcagttgtgccctggtggtgcgcctgtac
atcctgcaagtcgtcgagttcgattaccactcgaccatctccgaaaacaatcgcgtccat
gtcctgccgatcccgccgacacgcggcctgatttacgatcgcaacggcgtgttgctggct
gataatcgtcccagctacaacctgaccatcacccgcgaacgggcgactgacgtcaatcaa
gagctggatgaagtcatcaacctcctgcacctgcccgccgaagaccgcgcagtctttgac
aaagccatgaagcagtcgcgtcatccgtttacacccgtaacgctgttctatgagctgacc
gaagaacagatcgccgtgctggcagttaacgagttccgtctaccgggcctggatgtcgag
ccacaattcgttcgtaactacccgttgggtgcgcacttcgcacactcgatcggttacgtt
ggccgtatcaacgaaaaagaatccaaaaccctcgactccgtcgaataccgtggcacccaa
tccatcggcaagacgggtatcgaacgcttctatgagccacagctgcacggccacgtcggt
tacgaggaggtagagaccaacgcacaaggtcgagtactacgggttctgaaacacaccgat
ccgataccaggcaaaaacatagttctaagtctcgacgtcaaacttcaggaggccgcggaa
gctgcattgggcgaccgccgcggctcagtggttgcgctggatccatcgaccggcgaagtg
ctggccatggtcagcaatccgagcttcgaccctaacctgttcgtgactggtatcagctcc
aaggaatattccgcgctgcgagactccatcgaccgaccgctgttcaaccgagtactgcgc
ggtctgtacgctcccggttcaacgatcaaaccagaggtggcgattgccggactcgacacc
ggcgtggtcacgccacaaacccgagtcttcgatccgggctactaccaactaccggatttc
gaccacaagtatcgcaactggaaccacagcggcgacggttgggtagacatggatgcagcg
atcatgcggtccaacgacacctacttctacgacctggcgcacaagctcggcatcgatcgc
cttcacgactacatggcgatgttcggccttggcgagaaagtctcgctcgacatgttcgag
gagtcaccgggcttgatgccgtcccaggcgtggaagcgcgccacccggcgtcaggcctgg
ttccccggcgaaaccgtgatcctcggtatcggccagggctacatgcaggtcacgccgctg
caactggctcaagccaccgcactgatcgccaacaagggcgtctggaaccgtccgcacctg
gccaagaccgtggatggtgtggcaccggtggacgagcacccgatgccgaacatcctgctc
aaggatccgcgggactgggagcaggtcaaccacggcatgcagatggtgatgcacgatgcc
cgaggcattgctcgtgcggcagcggccggtgcgcaataccgcatcgccggcaagagtggt
acggcgcaggtggtggcgatcaaacagggtgagcgttacaaccgcgagaaaaccctcgag
cgacatcgtgacaacgccctgtttgtcgggtttgccccggccgagcatccgaaaatcgcg
atctcggtgatgatcgaaaacggcgaggccggtggccgagttgcaggtccggtggtgcgg
cagatcatggacgcctggctactcgaccaggacggtcacctcaagccgcaatacgcggcg
ccgaccaaagcgccgggcgatcctcacgtgtaa
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