Pseudomonas glycinae: AWU82_16350
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Entry
AWU82_16350 CDS
T06994
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
pgy
Pseudomonas glycinae
Pathway
pgy02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pgy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AWU82_16350
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pgy02022
]
AWU82_16350
02035 Bacterial motility proteins [BR:
pgy02035
]
AWU82_16350
Two-component system [BR:
pgy02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
AWU82_16350
Bacterial motility proteins [BR:
pgy02035
]
Pilus system
Twitching motility proteins
AWU82_16350
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
HTH_50
Mg_chelatase
Pre_tape_measure
HTH_30
AAA_16
VpsR
AAA_19
AAA_22
AAA
Motif
Other DBs
NCBI-ProteinID:
AMQ84812
UniProt:
A0ABM5ZMD8
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All DBs
Position
5761333..5762679
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AA seq
448 aa
AA seq
DB search
MNTSPRQKILIVDDEPDIRELLEITLGRMKLDTFSARNLAEAQALLHRESFDLCLTDMRL
PDGTGLELVQHIQQRYPQLPVAMITAYGSLETAINALKAGAFDFLTKPVDLTRLRELVGS
ALRMPPAGNVCTSIDRRLLGESPPMRNLRKQIDKLARSQAPVYISGESGSGKELVARLIH
EQGPRASRPFVPVNCGAIPSELMESEFFGHRKGSFSGAVEDKPGLFQAAHGGTLFLDEVA
DLPLPMQVKLLRAIQEKAVRSVGGQQETVVDVRILCATHKDLDAEVAAERFRQDLYYRLN
VIELRVPSLRERREDIEALAGHVLRRLANGTGQPAARLHPHALEALKNYRFPGNVRELEN
VLERAHTLCENHTIEAEDLRLSEGNSAAEGGVADLTRIDNLEDYLESVERKLILQALEET
RWNRTAAAQRLSLSFRSMRYRLKKLGLD
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
ttgaacacgagcccacggcaaaaaatcctcatcgtcgacgacgagccggatatccgcgaa
ctcctggaaatcaccctgggacggatgaaactcgacaccttcagcgcacgcaatctcgca
gaagcccaggcgctgctgcaccgcgagagtttcgatctgtgcctgaccgacatgcgcctg
cccgacggcaccggcctggagctggtgcagcacatccagcaacgttatccacaactgccg
gtggcgatgattaccgcctacggtagcctggaaacggcgatcaacgccctgaaggccggg
gctttcgacttcctcaccaaaccggtggacctgacgcgtctgcgcgagctggtcggctcg
gcgttgcgcatgccgccggcgggtaatgtctgcacctcgatcgaccgccggttgcttggc
gaatcgccgccgatgcgcaacctgcgcaaacagatcgacaaactggctcgcagccaggca
ccggtctacatcagtggcgagtccggcagcggcaaggagctggtggcccgactgattcat
gaacagggcccgcgcgccagccggccattcgtgccggtgaactgcggggcgattccttca
gagctgatggagagcgaattcttcggccaccgcaaaggcagtttcagcggtgcggtggag
gataaaccgggactgtttcaggcagcccacggtggcacgctgtttcttgacgaggtggcg
gacctgccgctgccgatgcaggtcaagctgctgcgggcgatccaggaaaaagccgtgcgc
agcgtcggcggtcaacaggaaaccgtggttgatgtgcgcatcctttgcgcgacgcacaag
gacctcgacgcggaagtggctgccgagcgctttcgtcaggatctgtattaccggttgaac
gtgatcgaactgcgtgtgccgtccctgcgcgaacgtcgcgaggacatcgaagcactggcc
ggccatgtactcaggcgcctggccaatggcaccggacaaccggcggcacgtcttcatccc
catgcccttgaggcgctgaaaaactaccgctttccgggtaacgtgcgggaactggagaac
gtgctcgaacgggcgcacaccctgtgtgaaaaccacacgatcgaggccgaggatttacgc
ctgagtgagggcaacagtgccgccgagggcggggtcgcagatctcacccggatcgacaac
ctcgaagactatcttgagagcgtcgagcgcaaactgattctgcaggcactggaagagacc
cgctggaatcgcacggcggcggcgcagcggttgagtctgtcgtttcggtcgatgcgctac
aggctcaagaagctcgggctggactga
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